Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20909
(366 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical p... 50 5e-07
Z82070-4|CAB04913.2| 227|Caenorhabditis elegans Hypothetical pr... 27 3.1
U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant respons... 27 3.1
U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant respons... 27 3.1
U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant respons... 27 3.1
AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant respo... 27 3.1
U41535-2|AAB63402.1| 731|Caenorhabditis elegans Hypothetical pr... 27 5.4
U41535-1|AAK67247.1| 734|Caenorhabditis elegans Hypothetical pr... 27 5.4
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 27 5.4
AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical ... 27 5.4
U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resis... 26 7.2
>Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical
protein F25H2.11 protein.
Length = 181
Score = 50.0 bits (114), Expect = 5e-07
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +2
Query: 62 MKIYKDIITGDEMFSDTYKMKLVDEVIY--RSDR*VGDESTG*YPDRGF*SFXXXXXXXX 235
M IYKDI T DE+ SD++ MKLVD+++Y + V E +
Sbjct: 1 MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60
Query: 236 XXXXXXXVDIVLNHRLVETYAFGDKKSYTLYLKGLYEKI 352
+DIVLNH+LVE + D + Y+K + +
Sbjct: 61 DEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNV 99
Score = 36.3 bits (80), Expect = 0.007
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +3
Query: 138 LFTEVTGRLVTRAQGDIQIEGFNPSAEEA--DEGTDSAVE 251
L E G+ V R +G+I + G NPSAEE D+G+D VE
Sbjct: 26 LVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVE 65
>Z82070-4|CAB04913.2| 227|Caenorhabditis elegans Hypothetical
protein W04E12.4 protein.
Length = 227
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 147 EVTGRLVTR-AQGDIQIEGFNPSAEEADEGTDSAVESEL 260
E+ G+ V + D ++ S E+D+GTDS +ESE+
Sbjct: 136 EIIGQWVADDSDNDENVKNSPTSEPESDDGTDSDLESEI 174
>U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant response
abnormal protein4, isoform a protein.
Length = 445
Score = 27.5 bits (58), Expect = 3.1
Identities = 7/35 (20%), Positives = 22/35 (62%)
Frame = -3
Query: 112 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFS 8
+++ HL+ + ++LH++ +E ++ ++ K G +
Sbjct: 298 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGIT 332
>U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant response
abnormal protein4, isoform c protein.
Length = 473
Score = 27.5 bits (58), Expect = 3.1
Identities = 7/35 (20%), Positives = 22/35 (62%)
Frame = -3
Query: 112 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFS 8
+++ HL+ + ++LH++ +E ++ ++ K G +
Sbjct: 326 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGIT 360
>U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant response
abnormal protein4, isoform b protein.
Length = 475
Score = 27.5 bits (58), Expect = 3.1
Identities = 7/35 (20%), Positives = 22/35 (62%)
Frame = -3
Query: 112 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFS 8
+++ HL+ + ++LH++ +E ++ ++ K G +
Sbjct: 328 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGIT 362
>AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant response
protein ODR-4 protein.
Length = 445
Score = 27.5 bits (58), Expect = 3.1
Identities = 7/35 (20%), Positives = 22/35 (62%)
Frame = -3
Query: 112 SVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFS 8
+++ HL+ + ++LH++ +E ++ ++ K G +
Sbjct: 298 AIKHHLVRNLFARVELHYESMEVVEEERSPKTGIT 332
>U41535-2|AAB63402.1| 731|Caenorhabditis elegans Hypothetical
protein F18A1.6a protein.
Length = 731
Score = 26.6 bits (56), Expect = 5.4
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -3
Query: 199 PSIWISPCALVTNLPVTSVNNFIDQFHFVSVREHLITSDNVLIDLHFDGLEA 44
P I +SPC + SVN F+ Q + + E + + I L+FD L A
Sbjct: 622 PQIELSPCRTLE-----SVNTFLKQMDLLPMEESVRSGFCTQIMLYFDNLAA 668
>U41535-1|AAK67247.1| 734|Caenorhabditis elegans Hypothetical
protein F18A1.6b protein.
Length = 734
Score = 26.6 bits (56), Expect = 5.4
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -3
Query: 199 PSIWISPCALVTNLPVTSVNNFIDQFHFVSVREHLITSDNVLIDLHFDGLEA 44
P I +SPC + SVN F+ Q + + E + + I L+FD L A
Sbjct: 625 PQIELSPCRTLE-----SVNTFLKQMDLLPMEESVRSGFCTQIMLYFDNLAA 671
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
protein C18H2.1 protein.
Length = 1770
Score = 26.6 bits (56), Expect = 5.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 145 VNNFIDQFHFVSVREHLITSDNVLIDLHFDGLEAIKNNKNRKNGFSP 5
+ +F D+F S+ E I D L+DL + I N + N F P
Sbjct: 150 ITDFFDRFKNGSLDEIFIPCDTTLLDLVIN-FTTIANKADYPNSFKP 195
>AF101318-7|AAC69345.1| 826|Caenorhabditis elegans Hypothetical
protein Y73C8C.3 protein.
Length = 826
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 118 FVSVREHLITSDNVLIDLHFDGLEAIKNN 32
++ +RE ++ SD L+ L LE IKNN
Sbjct: 138 YLKIRESVLKSDCELVPLAQSDLERIKNN 166
>U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug
resistance protein familyprotein 6 protein.
Length = 1396
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 205 LKPSIWISPCALVTNLPVTSVNNFID 128
LK IW+ C L+T L +NNF+D
Sbjct: 790 LKYGIWLVVCVLITQL----MNNFVD 811
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,896,425
Number of Sequences: 27780
Number of extensions: 141612
Number of successful extensions: 392
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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