Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20903
         (579 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022710-1|AAY55126.1|  275|Drosophila melanogaster IP07622p pro...    30   2.6  
BT022643-1|AAY55059.1|  275|Drosophila melanogaster IP07722p pro...    30   2.6  
BT011168-1|AAR84383.1|  679|Drosophila melanogaster GH09258p pro...    29   4.5  
AE014297-3135|AAF55980.2|  744|Drosophila melanogaster CG7069-PA...    29   4.5  
BT010058-1|AAQ22527.1|  865|Drosophila melanogaster LD15974p pro...    29   6.0  

>BT022710-1|AAY55126.1|  275|Drosophila melanogaster IP07622p
           protein.
          Length = 275

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +3

Query: 192 GHVIYALCNPLYLRVSHLNILINVSCFCKNLL*SHIHPSRSVHVAC-LKLWAS 347
           GH ++    P Y++  H NI +    +C     + I P+   H+ C  K W++
Sbjct: 19  GHTVFRTRWPTYVQKKHYNIPVKPPDYCN----ADICPANKKHITCGFKFWST 67


>BT022643-1|AAY55059.1|  275|Drosophila melanogaster IP07722p
           protein.
          Length = 275

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +3

Query: 192 GHVIYALCNPLYLRVSHLNILINVSCFCKNLL*SHIHPSRSVHVAC-LKLWAS 347
           GH ++    P Y++  H NI +    +C     + I P+   H+ C  K W++
Sbjct: 19  GHTVFRTRWPTYVQKKHYNIPVKPPDYCN----ADICPANKKHITCGFKFWST 67


>BT011168-1|AAR84383.1|  679|Drosophila melanogaster GH09258p
           protein.
          Length = 679

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 442 CLKSPVRSSCKQRPKKMLCSKVSGTKTAMETKLAHSFK 329
           C K  +  SCK+R +K  C K+   +   + KLA   K
Sbjct: 475 CRKLALEQSCKERAEKEECRKLQQAEECQKQKLAKKCK 512


>AE014297-3135|AAF55980.2|  744|Drosophila melanogaster CG7069-PA
           protein.
          Length = 744

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 442 CLKSPVRSSCKQRPKKMLCSKVSGTKTAMETKLAHSFK 329
           C K  +  SCK+R +K  C K+   +   + KLA   K
Sbjct: 475 CRKLALEQSCKERAEKEECRKLQQAEECQKQKLAKKCK 512


>BT010058-1|AAQ22527.1|  865|Drosophila melanogaster LD15974p
           protein.
          Length = 865

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -2

Query: 140 TGTMHVYYIS*QLSQRSPVLIVNYACIMQYYSTQRCSYGGGNT 12
           T    V   S  + Q+S VLI N A   Q  S  + + GGGNT
Sbjct: 148 TSVSDVVNASLYMQQKSTVLIANEAAESQQSSAMQNAGGGGNT 190


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,250,308
Number of Sequences: 53049
Number of extensions: 526692
Number of successful extensions: 1203
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)