Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20902
         (524 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   0.94 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   2.9  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   2.9  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   5.0  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   6.7  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 202 LLSRISEKPNIGIICGSGWVR 264
           LL   ++KPN+  ICG  + R
Sbjct: 241 LLEEDNQKPNVCRICGKSYAR 261


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 110 VTKQFFSTISFAFIGAITTLS 48
           + KQF  T  F F+  + TLS
Sbjct: 463 MVKQFLFTQKFTFVAGLATLS 483


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 169 NIQFFHFHYNQIRFPAGPSA*PNNFSP 89
           N+Q +  H+N   FP      P+ F P
Sbjct: 388 NLQIYDMHHNPNVFPDPEKFDPDRFLP 414


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 169 NIQFFHFHYNQIRFPAGPSA*PNNFSP 89
           N+Q +  H+N   FP      P+ F P
Sbjct: 388 NLQIYDMHHNPNVFPDPEKFDPDRFLP 414


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/42 (23%), Positives = 16/42 (38%)
 Frame = -2

Query: 214 FSTARNLRSPLMFHKNIQFFHFHYNQIRFPAGPSA*PNNFSP 89
           F T   L+ P     ++  +  H+N   +P      P  F P
Sbjct: 90  FVTCNGLKLPKSTITHLHIYDLHHNPDIYPDPEKFDPERFRP 131


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 330 PNFPISTVEGHHGQLV 377
           PN P+S   G HG L+
Sbjct: 43  PNSPVSFSMGGHGSLL 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,178
Number of Sequences: 336
Number of extensions: 3004
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)