Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20902
         (524 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045645-1|AAC02605.1|  301|Caenorhabditis elegans Hypothetical ...    77   6e-15
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr...    28   3.6  
U61949-2|AAB03152.1|  884|Caenorhabditis elegans Puromycin-sensi...    27   6.2  
U61949-1|AAY44009.1|  948|Caenorhabditis elegans Puromycin-sensi...    27   6.2  
Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical pr...    27   8.2  
AC006801-1|AAF60752.2|  501|Caenorhabditis elegans Hypothetical ...    27   8.2  

>AF045645-1|AAC02605.1|  301|Caenorhabditis elegans Hypothetical
           protein K02D7.1 protein.
          Length = 301

 Score = 77.4 bits (182), Expect = 6e-15
 Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
 Frame = +3

Query: 276 GSLAESIADGVRIPYEDIPNFPISTVEGHHGQLVFGHIEGVSVVAMQGRFHYYE-GYPLW 452
           G + +++ D   +PY  IP FP + V GH G ++FG + G  VV +QGRFH YE    L 
Sbjct: 54  GPIGDTVQDATILPYSKIPGFPTTHVVGHKGNMIFGKLGGKKVVCLQGRFHPYEHNMDLA 113

Query: 453 KCCLPXXVMKLXGVKILIATNS 518
            C LP  VM   G+KI+I +N+
Sbjct: 114 LCTLPVRVMHQLGIKIMIVSNA 135


>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
           protein C04A11.3 protein.
          Length = 1228

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -1

Query: 398 HSFYVTENKLTMMTLHCAYGKVWNIFV 318
           +S Y  ENKLTM+   C  G V NI V
Sbjct: 97  YSTYFFENKLTMLLEFCGGGAVDNIIV 123


>U61949-2|AAB03152.1|  884|Caenorhabditis elegans
           Puromycin-sensitive aminopeptidaseprotein 1, isoform a
           protein.
          Length = 884

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 224 FSDILDSKKFAVSTNVS*EYPVFSFPLQSDPISGRTFCVT 105
           + D   ++KF  ST     Y  ++FP   +PI   TF VT
Sbjct: 126 YKDKNGTEKFLASTQFESTYARYAFPCFDEPIYKATFDVT 165


>U61949-1|AAY44009.1|  948|Caenorhabditis elegans
           Puromycin-sensitive aminopeptidaseprotein 1, isoform b
           protein.
          Length = 948

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 224 FSDILDSKKFAVSTNVS*EYPVFSFPLQSDPISGRTFCVT 105
           + D   ++KF  ST     Y  ++FP   +PI   TF VT
Sbjct: 190 YKDKNGTEKFLASTQFESTYARYAFPCFDEPIYKATFDVT 229


>Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical
           protein F59F3.1 protein.
          Length = 1227

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = -1

Query: 224 FSDILDSKKFAVSTNVS*EY 165
           FS+ LD K FAVSTN+S  Y
Sbjct: 411 FSENLDIKAFAVSTNMSGTY 430


>AC006801-1|AAF60752.2|  501|Caenorhabditis elegans Hypothetical
           protein Y52D5A.2 protein.
          Length = 501

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +1

Query: 82  DIVEKNCLVTQKV---LPEIGSDCNGNEKT 162
           D+  +NCLVTQ +   + + G  C G E T
Sbjct: 259 DLAARNCLVTQDLKAKISDFGLSCQGTEVT 288


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,607,138
Number of Sequences: 27780
Number of extensions: 277045
Number of successful extensions: 766
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)