Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20899
         (587 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    25   0.47 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   1.4  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   1.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   5.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.7  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 218 VSFFKSFGFLPVCSA 174
           ++  K FGFLPVCS+
Sbjct: 19  INLTKIFGFLPVCSS 33


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -1

Query: 266 FYLFAISPLLFFITLRVSFFKSFGFLPVCSAITLN 162
           FYL A     +F+ +  + FK++  +  CS  +L+
Sbjct: 87  FYLEATDDFAYFLEVSNNNFKTYSNVTTCSYYSLD 121


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 302 SGSIIHYQAVYVFYLFAISPLLFFITLRVSFFKSFGF 192
           +G+IIH  +      FA+  LL    + VS F S  F
Sbjct: 26  TGNIIHTTSNKQLQFFAVEHLLIQCYIAVSIFGSSSF 62


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 305 NRRRRTIQWKMP 340
           NR+ R +QW+ P
Sbjct: 83  NRKNRVLQWREP 94


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/41 (21%), Positives = 18/41 (43%)
 Frame = -1

Query: 272 YVFYLFAISPLLFFITLRVSFFKSFGFLPVCSAITLNKHIL 150
           Y +Y F +  +   + + + +F     L  C+ I    H+L
Sbjct: 240 YFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLL 280


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 178 EQTGKNPNDLKKE 216
           +Q GK P ++KKE
Sbjct: 71  QQAGKKPENVKKE 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,107
Number of Sequences: 336
Number of extensions: 3004
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)