Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20899
         (587 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY748838-1|AAV28186.1|  155|Anopheles gambiae cytochrome P450 pr...    25   2.4  
AY745206-1|AAU93473.1|   91|Anopheles gambiae cytochrome P450 pr...    24   4.2  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   7.3  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   7.3  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   7.3  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   9.7  

>AY748838-1|AAV28186.1|  155|Anopheles gambiae cytochrome P450
           protein.
          Length = 155

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 342 EQAKSFLRNSYGVKGFKNKNKGHADIHIPFETKTIGM 452
           E  + F+ N++G+     K+      HIP +T  +GM
Sbjct: 41  EGLRLFMSNTFGIPHRALKDTTLCGYHIPKDTMLVGM 77


>AY745206-1|AAU93473.1|   91|Anopheles gambiae cytochrome P450
           protein.
          Length = 91

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +2

Query: 38  PRNPNQSKFNIMLQKTGLTLDISH*KVSVNLPVKV 142
           PRN    +  IML K GL L +S       +P KV
Sbjct: 53  PRNCIGLRQGIMLSKIGLVLMLSRFDFEATVPRKV 87


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 239 LFFITLRVSFFKSFGFLPVCSAITLN 162
           LF +TL  +   SFG+L  C++ +++
Sbjct: 555 LFIVTLVANVSTSFGYLISCASSSIS 580


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 239 LFFITLRVSFFKSFGFLPVCSAITLN 162
           LF +TL  +   SFG+L  C++ +++
Sbjct: 555 LFIVTLVANVSTSFGYLISCASSSIS 580


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 239 LFFITLRVSFFKSFGFLPVCSAITLN 162
           LF +TL  +   SFG+L  C++ +++
Sbjct: 533 LFIVTLVANVSTSFGYLISCASSSIS 558


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 22  YTIGDAKKSKPIQIQYHAPED 84
           YT+ D   + P+  QY+A  D
Sbjct: 175 YTLDDLSNTVPVNTQYNALND 195


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,717
Number of Sequences: 2352
Number of extensions: 11810
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)