Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20898
(609 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2MHH4 Cluster: Protein Ku70; n=19; Fungi/Metazoa group... 52 1e-05
UniRef50_A7RH48 Cluster: Predicted protein; n=1; Nematostella ve... 51 2e-05
UniRef50_UPI0000E45E6A Cluster: PREDICTED: similar to Ku70; n=4;... 50 4e-05
UniRef50_Q7QCL6 Cluster: ENSANGP00000010850; n=1; Anopheles gamb... 47 3e-04
UniRef50_Q4WUA2 Cluster: DSB repair complex subunit Ku70, putati... 47 3e-04
UniRef50_Q26228 Cluster: ATP-dependent DNA helicase 2 subunit 1;... 46 0.001
UniRef50_Q9FQ08 Cluster: Ku70-like protein; n=8; Magnoliophyta|R... 44 0.003
UniRef50_Q2H0I3 Cluster: Protein Ku70; n=2; Sordariomycetes|Rep:... 43 0.005
UniRef50_A2YIV5 Cluster: Putative uncharacterized protein; n=1; ... 41 0.020
UniRef50_A3BH97 Cluster: Putative uncharacterized protein; n=3; ... 40 0.035
UniRef50_Q2NGP9 Cluster: Member of asn/thr-rich large protein fa... 40 0.035
UniRef50_P12956 Cluster: ATP-dependent DNA helicase 2 subunit 1;... 39 0.081
UniRef50_Q4P415 Cluster: Putative uncharacterized protein; n=1; ... 37 0.43
UniRef50_A0DDG8 Cluster: Chromosome undetermined scaffold_46, wh... 35 1.7
UniRef50_Q8I612 Cluster: Putative uncharacterized protein; n=1; ... 33 4.0
UniRef50_Q556G9 Cluster: Putative uncharacterized protein; n=2; ... 33 4.0
UniRef50_A0RNP3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_A0RPJ0 Cluster: Cytolethal distending toxin A/C family;... 33 7.0
UniRef50_A6VY73 Cluster: Transcriptional regulator, GntR family;... 32 9.3
UniRef50_Q9GUN4 Cluster: Putative uncharacterized protein; n=2; ... 32 9.3
>UniRef50_Q2MHH4 Cluster: Protein Ku70; n=19; Fungi/Metazoa
group|Rep: Protein Ku70 - Aspergillus oryzae
Length = 655
Score = 51.6 bits (118), Expect = 1e-05
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +1
Query: 298 KSELLHCQEYGNEIIAFTDNEFKTINNPFGPAKLKLLGFKPETFLCKEKWF-LKNCSFLF 474
K E+ ++G + +AFT E K++ N FG ++++GFKP + L W +K+ SF++
Sbjct: 338 KWEIKKAYKFGGDQVAFTPEEMKSLRN-FGDPVIRIIGFKPLSAL--PFWANIKHPSFIY 394
Query: 475 PNEKSIEGSTTVSRQCTKHVLKQKL*LFV*FVLE*NS 585
P+E+ GST V + +L+ K V F+ N+
Sbjct: 395 PSEEDFVGSTRVFSALHQTLLRDKKAALVWFIARKNA 431
>UniRef50_A7RH48 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 607
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +1
Query: 292 LLKSELLHCQEYGNEIIAFTDNEFKTINNPFGPAKLKLLGFKPETFLCKEKWFLKNCSFL 471
L+ +++ Q++G E I F E ++ FG L L+GFKP L K + +K F+
Sbjct: 308 LMPTDIKFYQKFGGEKIIFEKEEVASMKK-FGDPGLLLMGFKPRVTL-KRFYHVKPAHFI 365
Query: 472 FPNEKSIEGSTTV 510
+P+EKSI GSTT+
Sbjct: 366 YPDEKSITGSTTL 378
>UniRef50_UPI0000E45E6A Cluster: PREDICTED: similar to Ku70; n=4;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Ku70 - Strongylocentrotus purpuratus
Length = 281
Score = 50.0 bits (114), Expect = 4e-05
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +1
Query: 292 LLKSELLHCQEYGNEIIAFTDNEFKTINNPFGPAKLKLLGFKPETFLCKEKWFLKNCSFL 471
L+ S++ Q YG + I F +E + + P L L+GFKP + L K+ + +K FL
Sbjct: 10 LMPSDIKKYQTYGGKNIIFEKDEVDEVKKFYDPG-LTLMGFKPRSAL-KKYFHVKPAQFL 67
Query: 472 FPNEKSIEGSTTV 510
FP+E S+ GS T+
Sbjct: 68 FPDETSVSGSNTL 80
>UniRef50_Q7QCL6 Cluster: ENSANGP00000010850; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000010850 - Anopheles gambiae
str. PEST
Length = 498
Score = 47.2 bits (107), Expect = 3e-04
Identities = 31/93 (33%), Positives = 46/93 (49%)
Frame = +1
Query: 265 DRVEEQEMPLLKSELLHCQEYGNEIIAFTDNEFKTINNPFGPAKLKLLGFKPETFLCKEK 444
+R EE LL E G E ++F E + P ++LLGFKP + + K
Sbjct: 262 EREEEDTKVLLPGEQRKSIAIGGEKVSFKPEEVAQMKQLLPPG-IRLLGFKPASVI-KMT 319
Query: 445 WFLKNCSFLFPNEKSIEGSTTVSRQCTKHVLKQ 543
L++ FL+PNE I GSTT+ R + L++
Sbjct: 320 NHLRSSLFLYPNESYINGSTTLYRALYEKCLEK 352
>UniRef50_Q4WUA2 Cluster: DSB repair complex subunit Ku70, putative;
n=3; Trichocomaceae|Rep: DSB repair complex subunit
Ku70, putative - Aspergillus fumigatus (Sartorya
fumigata)
Length = 691
Score = 47.2 bits (107), Expect = 3e-04
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +1
Query: 298 KSELLHCQEYGNEIIAFTDNEFKTINNPFGPAKLKLLGFKPETFLCKEKWF-LKNCSFLF 474
KSE+ ++GN+ ++FT E K + + FG ++++GFKP + L W +K+ F++
Sbjct: 337 KSEIRKAYKFGNDQVSFTPEEQKALRH-FGDPVIRIIGFKPLSAL--PFWANVKHPFFIY 393
Query: 475 PNEKSIEGSTTVSRQCTKHVLKQKL*LFV*FV 570
P+E+ GST V + +LK V F+
Sbjct: 394 PSEEDYVGSTRVFSALHQKLLKDHKMALVWFI 425
>UniRef50_Q26228 Cluster: ATP-dependent DNA helicase 2 subunit 1;
n=1; Rhipicephalus appendiculatus|Rep: ATP-dependent DNA
helicase 2 subunit 1 - Rhipicephalus appendiculatus
(Brown ear tick)
Length = 600
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/86 (31%), Positives = 46/86 (53%)
Frame = +1
Query: 292 LLKSELLHCQEYGNEIIAFTDNEFKTINNPFGPAKLKLLGFKPETFLCKEKWFLKNCSFL 471
L+ ++ QEYG F E K I + P L+LLGFKP ++L K+ ++ F+
Sbjct: 297 LMPGDISKTQEYGGRKAYFDICEVKQIKS-MAPPGLQLLGFKPLSYLEKQP-HVRPSHFV 354
Query: 472 FPNEKSIEGSTTVSRQCTKHVLKQKL 549
+P+E S+ GST + + L+ ++
Sbjct: 355 YPDEGSVRGSTRLFAALLQSCLRHRV 380
>UniRef50_Q9FQ08 Cluster: Ku70-like protein; n=8; Magnoliophyta|Rep:
Ku70-like protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 621
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/71 (35%), Positives = 39/71 (54%)
Frame = +1
Query: 292 LLKSELLHCQEYGNEIIAFTDNEFKTINNPFGPAKLKLLGFKPETFLCKEKWFLKNCSFL 471
+++ + Q Y N+ I FT E + L+LLGFKP + L K+ LK +FL
Sbjct: 321 IMQDPIQRIQPYKNQNIMFTVEELSQVKR-ISTGHLRLLGFKPLSCL-KDYHNLKPSTFL 378
Query: 472 FPNEKSIEGST 504
+P++K + GST
Sbjct: 379 YPSDKEVIGST 389
>UniRef50_Q2H0I3 Cluster: Protein Ku70; n=2; Sordariomycetes|Rep:
Protein Ku70 - Chaetomium globosum (Soil fungus)
Length = 622
Score = 43.2 bits (97), Expect = 0.005
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 268 RVEEQEMPLLKSELLHCQEYGNEIIAFTDNEFKTINNPFGPAKLKLLGFKPETFLCKEKW 447
+V+ + KSE+ ++G E I F E ++ N G L+++GFKP + L W
Sbjct: 319 KVDSATRTVDKSEVKKAYKFGGEYIHFKPEEAASLKN-LGGKVLRVIGFKPRSLL--PTW 375
Query: 448 F-LKNCSFLFPNEKSIEGST 504
+K F+FP+E+ GST
Sbjct: 376 ASVKKSIFIFPSEEHFVGST 395
>UniRef50_A2YIV5 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 408
Score = 41.1 bits (92), Expect = 0.020
Identities = 24/73 (32%), Positives = 40/73 (54%)
Frame = +1
Query: 292 LLKSELLHCQEYGNEIIAFTDNEFKTINNPFGPAKLKLLGFKPETFLCKEKWFLKNCSFL 471
LL+ Q Y ++I+ F+ E + L+LLGFKP +L K+ L+ +F+
Sbjct: 293 LLQDPQKRFQVYNDKIVKFSTRELSDVKR-VSSHHLRLLGFKPLDYL-KDYHNLRPSTFI 350
Query: 472 FPNEKSIEGSTTV 510
+P+++ I GST V
Sbjct: 351 YPSDEQIFGSTRV 363
>UniRef50_A3BH97 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 594
Score = 40.3 bits (90), Expect = 0.035
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +1
Query: 319 QEYGNEIIAFTDNEFKTINNPFGPAKLKLLGFKPETFLCKEKWFLKNCSFLFPNEKSIEG 498
Q Y ++I+ F+ E + L+LLGFKP +L K+ L+ +F++P+++ I G
Sbjct: 488 QVYNDKIVKFSTRELSDVKR-VSSHHLRLLGFKPLDYL-KDYHNLRPSTFIYPSDEQIFG 545
Query: 499 STTV 510
ST V
Sbjct: 546 STRV 549
>UniRef50_Q2NGP9 Cluster: Member of asn/thr-rich large protein family;
n=1; Methanosphaera stadtmanae DSM 3091|Rep: Member of
asn/thr-rich large protein family - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 2459
Score = 40.3 bits (90), Expect = 0.035
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +2
Query: 53 LILNECDRHLATAQLIFEIGNNVSIGISIYKLLKSNIEPKKVYLS-NETNAVVTSDTKTT 229
+IL+ CD L T++ F++ N SIGISIY + IE LS N T A+ K+
Sbjct: 1582 VILSACD-DLVTSRNNFKLNGNTSIGISIYGTSNNTIEFNDFKLSGNSTKAIEV--IKSN 1638
Query: 230 KVLVKPDTVWIL 265
+++++ +T+ IL
Sbjct: 1639 EIILRSNTITIL 1650
>UniRef50_P12956 Cluster: ATP-dependent DNA helicase 2 subunit 1;
n=45; Euteleostomi|Rep: ATP-dependent DNA helicase 2
subunit 1 - Homo sapiens (Human)
Length = 609
Score = 39.1 bits (87), Expect = 0.081
Identities = 18/65 (27%), Positives = 37/65 (56%)
Frame = +2
Query: 32 KIEDVTKLILNECDRHLATAQLIFEIGNNVSIGISIYKLLKSNIEPKKVYLSNETNAVVT 211
K+ED+ + + + R A ++L ++ ++ I + IY L++ ++P + L ETN V
Sbjct: 238 KLEDLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVK 297
Query: 212 SDTKT 226
+ T+T
Sbjct: 298 TKTRT 302
>UniRef50_Q4P415 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 713
Score = 36.7 bits (81), Expect = 0.43
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Frame = +1
Query: 289 PLLKSELLHCQEYGNEI-----IAFTDNEFKTINNPFGPA-KLKLLGFKPETFLCKEKWF 450
PL K +++ ++G + FT E ++I FG LKL+GF+ L + +W
Sbjct: 400 PLSKDQVIPAFQFGPSSSLRGQVTFTPGELRSIKT-FGMLPSLKLIGFRNRDDLLRFEWN 458
Query: 451 LKNCSFLFPNEKSIEGS 501
+K+ F++P++ +GS
Sbjct: 459 VKHSYFIYPSDSEWKGS 475
>UniRef50_A0DDG8 Cluster: Chromosome undetermined scaffold_46, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_46,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 2450
Score = 34.7 bits (76), Expect = 1.7
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 134 SIYKLLKSNIEPKKVYLSNETNAVVTSDTKTTKVLVKPDTVWILIGLKNKKCLYLSLS 307
S +K ++ EP K L N N T+ K+ K T W++ N KC Y S S
Sbjct: 820 SNFKCIEVKDEPYKNVLLNTLNCTQTNLNLCGKITTKGQTCWVVDNNSNLKCSYYSAS 877
>UniRef50_Q8I612 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 992
Score = 33.5 bits (73), Expect = 4.0
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +2
Query: 116 NVSIGISIYKLLKSNIEPKKVYLSNETNAVVTSDTKTTKVLVKPDTVWILIGLKNKKCLY 295
N+ I + L N+ +Y+ ETN ++ DT+ ++ + ++ K K+CL
Sbjct: 595 NIDIHLVTRNLKVENVIDTNIYVYTETNIIIFGDTRNIQL-----APYNILNTKQKECLD 649
Query: 296 LSLSCFTVKN 325
S FT KN
Sbjct: 650 KSKIIFTEKN 659
>UniRef50_Q556G9 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 406
Score = 33.5 bits (73), Expect = 4.0
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +2
Query: 140 YKLLKSNIEPKKVYLSNETNAVVTSDTKTTKVLVKPDTVWILIGLKNKKCLY 295
YK+L+S I+ K + + N +V+ +TKTTK + + + ++G + + Y
Sbjct: 26 YKVLESTIQDDKKKIEKKYNELVSEETKTTKEIEAIENAFKILGTEKYRNAY 77
>UniRef50_A0RNP3 Cluster: Putative uncharacterized protein; n=1;
Campylobacter fetus subsp. fetus 82-40|Rep: Putative
uncharacterized protein - Campylobacter fetus subsp.
fetus (strain 82-40)
Length = 245
Score = 33.1 bits (72), Expect = 5.3
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 412 FKPE-TFLCKEKWFLKNCSFLFPNEKSIEGSTTVSRQCTKHVLKQ 543
FKPE ++C E W +K+ LFPNEK EGS V + LK+
Sbjct: 96 FKPEGAYIC-ESWIVKSGDPLFPNEK--EGSWAVGIKLESDELKE 137
>UniRef50_A0RPJ0 Cluster: Cytolethal distending toxin A/C family;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Cytolethal distending toxin A/C family - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 183
Score = 32.7 bits (71), Expect = 7.0
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 2 NKNSLPKSVWKIEDVTKLILNECDRHLATAQLIFEIGNNVSIGISIY-KLLKSNIEPKKV 178
N +SL K+ W + ++T + D T Q + + +NV +G+S+ KL + E V
Sbjct: 49 NPSSLIKTNWNLREITLPYIISKDYPFGTVQFVSPVNDNVCLGLSLAGKLTTMSCESTAV 108
Query: 179 YLSNETNAVVTSDTKTTKV 235
+++ ++T ++
Sbjct: 109 GNYGSVFSILPTNTSAVQI 127
>UniRef50_A6VY73 Cluster: Transcriptional regulator, GntR family;
n=1; Marinomonas sp. MWYL1|Rep: Transcriptional
regulator, GntR family - Marinomonas sp. MWYL1
Length = 219
Score = 32.3 bits (70), Expect = 9.3
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +2
Query: 44 VTKLILNECDRHLATAQLIFEIGNNVSIGISIYKLLKSNIEPKKVYLSN---ETNAVVTS 214
V++ I+ EC RHL + +L+ I N+ + SI SN E K++Y E +AV
Sbjct: 44 VSRTIVRECIRHLESERLVVGIPNSGFVVASI-----SNAEVKEIYEIRTLLECSAVKAC 98
Query: 215 DTKTTKVLVK 244
K T ++K
Sbjct: 99 SLKATPTVIK 108
>UniRef50_Q9GUN4 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 460
Score = 32.3 bits (70), Expect = 9.3
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = +2
Query: 5 KNSLPKSVWKIEDVTKL----ILNECDRHLATAQLIFEIGNNVSIGISIYKLLKSNIEPK 172
KN + V K+E+ +L I+ C + LI E ++ +++ SN+E +
Sbjct: 35 KNFIISYVRKLEENKELYSAGIVGTCMPDIFRKPLILETPTAITHELTLQWTTVSNVEEQ 94
Query: 173 KVYLSNETNAVVTSDTKTTKVL 238
KV +++E + + DTKT K L
Sbjct: 95 KVMVTDENSTMSEVDTKTLKDL 116
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,599,070
Number of Sequences: 1657284
Number of extensions: 9648464
Number of successful extensions: 25477
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 24679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25468
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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