Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20898
         (609 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069384-1|AAL39529.1|  469|Drosophila melanogaster LD09414p pro...    29   5.0  
AE014297-1917|AAF55111.1|  469|Drosophila melanogaster CG7265-PA...    29   5.0  
AE014296-1207|ABI31239.1| 1766|Drosophila melanogaster CG32387-P...    29   6.6  

>AY069384-1|AAL39529.1|  469|Drosophila melanogaster LD09414p
           protein.
          Length = 469

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/68 (27%), Positives = 34/68 (50%)
 Frame = +2

Query: 104 EIGNNVSIGISIYKLLKSNIEPKKVYLSNETNAVVTSDTKTTKVLVKPDTVWILIGLKNK 283
           +IG     G  + K L   +EPK++ L  E    + +++ TT+     + + I IG  N+
Sbjct: 162 DIGYQHVYGEKLKKQLSEILEPKELLL--ELFPPIEAESTTTRETTNLERICIFIGADNQ 219

Query: 284 KCLYLSLS 307
           +   LSL+
Sbjct: 220 RFANLSLT 227


>AE014297-1917|AAF55111.1|  469|Drosophila melanogaster CG7265-PA
           protein.
          Length = 469

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/68 (27%), Positives = 34/68 (50%)
 Frame = +2

Query: 104 EIGNNVSIGISIYKLLKSNIEPKKVYLSNETNAVVTSDTKTTKVLVKPDTVWILIGLKNK 283
           +IG     G  + K L   +EPK++ L  E    + +++ TT+     + + I IG  N+
Sbjct: 162 DIGYQHVYGEKLKKQLSEILEPKELLL--ELFPPIEAESTTTRETTNLERICIFIGADNQ 219

Query: 284 KCLYLSLS 307
           +   LSL+
Sbjct: 220 RFANLSLT 227


>AE014296-1207|ABI31239.1| 1766|Drosophila melanogaster CG32387-PC,
           isoform C protein.
          Length = 1766

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 404 CWDSNQKLSSVKRNGF*KIVLSYSLMKNQ*KVLQLSQGNAPSM 532
           CW  N++  S +R+G   +++   L   Q  +LQL+ G+  S+
Sbjct: 556 CWARNKQGHSARRSGEVTVIVPPKLSPFQTNILQLNMGDRASL 598


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,346,895
Number of Sequences: 53049
Number of extensions: 434102
Number of successful extensions: 1140
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)