Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20898
         (609 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    23   3.1  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   5.4  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           21   7.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.4  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   9.4  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   9.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   9.4  

>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 542 CFNTCLVHCLETVVEPSIDFSL 477
           C+ TC++  L T    + DF +
Sbjct: 67  CYTTCIMKLLRTFKNGNFDFDM 88


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 274 EEQEMPLLKSELLHCQEYGNEIIAFTDNE 360
           E+  +  L  +LL C+  G+ ++   DNE
Sbjct: 179 EKGALVTLSVQLLSCEVNGSTLVYIGDNE 207


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 13/59 (22%), Positives = 28/59 (47%)
 Frame = +2

Query: 38  EDVTKLILNECDRHLATAQLIFEIGNNVSIGISIYKLLKSNIEPKKVYLSNETNAVVTS 214
           E++TKL+    ++ + T+  +   GN         +++++ +    V+    T AVV S
Sbjct: 41  EELTKLVQGFEEQDILTSSGVTLAGNRYIYLSGTDRVIRAKLGKVGVHCMKTTQAVVVS 99


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 401 NCWDSNQKLSSVKRN 445
           N WDS ++ S+ +RN
Sbjct: 268 NHWDSGRRKSAAQRN 282


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 449 NHFSLQRKVSGLNPNSFSFAGPNGLF 372
           N F    +    N N F+F   +GLF
Sbjct: 215 NFFYFDPRYGNYNINGFNFQWKDGLF 240


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 416 LNPNSFSFAGPN 381
           +NP +FS +GPN
Sbjct: 58  INPGNFSPSGPN 69


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 416 LNPNSFSFAGPN 381
           +NP +FS +GPN
Sbjct: 58  INPGNFSPSGPN 69


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,229
Number of Sequences: 438
Number of extensions: 3084
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)