Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20886
         (405 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    28   0.030
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   2.0  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   3.5  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   3.5  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   3.5  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   3.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   4.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    20   8.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   8.0  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 0.030
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 98  SLSRFPARLNSVNYAQAASNAPKITFVKFEPPKEE 202
           SL RF     +VNY Q  S   KI+ +K  PP EE
Sbjct: 9   SLERF-CTYGNVNYRQRRSQPLKISCLKTTPPPEE 42


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 197 EEHHDVRNAKLNRPLSPHLKYTPSN*LLC 283
           E+ HD   A L RP  P ++  P    LC
Sbjct: 266 EKSHDPFIASLVRPHGPVIEKKPEGAFLC 294


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 197 EEHHDVRNAKLNRPLSPHLKYTPSN*LLC 283
           E+ HD   A L RP  P ++  P    LC
Sbjct: 266 EKVHDPFIASLVRPHGPVIEKKPEGAFLC 294


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 197 EEHHDVRNAKLNRPLSPHLKYTPSN*LLC 283
           E+ HD   A L RP  P ++  P    LC
Sbjct: 266 EKVHDPFIASLVRPHGPVIEKKPEGAFLC 294


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 197 EEHHDVRNAKLNRPLSPHLKYTPSN*LLC 283
           E+ HD   A L RP  P ++  P    LC
Sbjct: 266 EKVHDPFIASLVRPHGPVIEKKPEGAFLC 294


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 197 EEHHDVRNAKLNRPLSPHLKYTPSN*LLC 283
           E+ HD   A L RP  P ++  P    LC
Sbjct: 265 EKVHDPFIASLVRPHGPVIEKKPEGAFLC 293


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
 Frame = +2

Query: 92  LASLSRFPARLNSVNYAQAASNAPKITFVKFEPPKEEHHDV----RNAKLNRPLSPHLKY 259
           L SL  F    N+ NY   A N P      ++ P  +  DV    ++A ++   SP  KY
Sbjct: 57  LPSLFPFSPCNNTANYKSEAQNQPS----SYKQPSSDMADVLLSLKHAVVHPGQSPAEKY 112


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 77  PVWCS*TKPYYQIK 36
           P   S TKPYY++K
Sbjct: 437 PTENSPTKPYYKLK 450


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 9/42 (21%), Positives = 22/42 (52%)
 Frame = -2

Query: 314 IIPVALCVIESTAVSWKEYILNEEKVDDLA*HSSHHDVLLLG 189
           I+ +  C+I    +S    ++  + +D+++  +    VL+LG
Sbjct: 252 ILLILYCIIAKNLMSNAATLVLNKHIDNISLRARKQVVLMLG 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,014
Number of Sequences: 336
Number of extensions: 1542
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)