Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20886
         (405 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             22   7.4  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    22   7.4  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 161 PKITFVKFEPPKEEHHDVRNAKLNR 235
           P +  + +EPP  EH   RN ++ R
Sbjct: 125 PDVVCITWEPPTREH---RNGQITR 146


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
 Frame = +2

Query: 8   SVKTTTIHTV*SDNMALFSCTRLGSRSVLASLSRFPARLNSVNYAQAASNAPKITFVKFE 187
           S+ TTT  T  S  +   + T L   S+ +S SRF   L         +N P+  F    
Sbjct: 92  SITTTTTSTCHSHLLPSLAITGL---SIGSSNSRF---LRQFGPQFTGTNRPQNWFYSRN 145

Query: 188 PPKE---EHHDVRNAKLNRPLSPHLKYTP 265
                  EHH+  NA+L++ +    +  P
Sbjct: 146 NNNNNNNEHHNTYNARLSKLMQEKTRNAP 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 364,903
Number of Sequences: 2352
Number of extensions: 5585
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)