Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20881
(355 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 28 0.032
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 23 0.92
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 0.92
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 2.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 2.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 2.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 2.1
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 22 2.1
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 22 2.1
AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 22 2.1
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 22 2.1
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 21 4.9
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 20 8.6
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 27.9 bits (59), Expect = 0.032
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +3
Query: 111 KPISACCNIPELGNPEPLAECSN---PKLPGPC-KDIQCVFEKSGFLTENKTLSRKHTKR 278
K ++ +P++G P+P + CS PG C + + C++ K L + K
Sbjct: 1259 KQLAQKYQLPKMGGPQPYSACSENAFAAYPGDCTRYLHCLWGKYEVFNCAPGLHWDNNKN 1318
Query: 279 ISDNGRKST 305
I D K+T
Sbjct: 1319 ICDWPEKAT 1327
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 23.0 bits (47), Expect = 0.92
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3
Query: 65 DTNFHFYDFSLTT 27
D N H YD+ LTT
Sbjct: 268 DPNSHLYDYDLTT 280
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 23.0 bits (47), Expect = 0.92
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3
Query: 65 DTNFHFYDFSLTT 27
D N H YD+ LTT
Sbjct: 268 DPNSHLYDYDLTT 280
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 2.1
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -3
Query: 191 RQLWVGTFCERFWIPQLRNV--TARRNWFQS 105
R W+ FW+PQL ++ ++R +F+S
Sbjct: 128 RVAWMWCLIFAFWVPQLGSLFRSSRMCFFKS 158
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 2.1
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -3
Query: 191 RQLWVGTFCERFWIPQLRNV--TARRNWFQS 105
R W+ FW+PQL ++ ++R +F+S
Sbjct: 128 RVAWMWCLIFAFWVPQLGSLFRSSRMCFFKS 158
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 2.1
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -3
Query: 191 RQLWVGTFCERFWIPQLRNV--TARRNWFQS 105
R W+ FW+PQL ++ ++R +F+S
Sbjct: 128 RVAWMWCLIFAFWVPQLGSLFRSSRMCFFKS 158
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 2.1
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -3
Query: 191 RQLWVGTFCERFWIPQLRNV--TARRNWFQS 105
R W+ FW+PQL ++ ++R +F+S
Sbjct: 128 RVAWMWCLIFAFWVPQLGSLFRSSRMCFFKS 158
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 21.8 bits (44), Expect = 2.1
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Frame = +3
Query: 156 EPLAECSNPKLPG--PCKDI 209
+PL CS P PG P DI
Sbjct: 111 DPLNSCSQPAAPGGQPIPDI 130
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 21.8 bits (44), Expect = 2.1
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Frame = +3
Query: 156 EPLAECSNPKLPG--PCKDI 209
+PL CS P PG P DI
Sbjct: 170 DPLNSCSQPAAPGGQPIPDI 189
>AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A
protein.
Length = 150
Score = 21.8 bits (44), Expect = 2.1
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Frame = +3
Query: 156 EPLAECSNPKLPG--PCKDI 209
+PL CS P PG P DI
Sbjct: 111 DPLNSCSQPAAPGGQPIPDI 130
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 21.8 bits (44), Expect = 2.1
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Frame = +3
Query: 156 EPLAECSNPKLPG--PCKDI 209
+PL CS P PG P DI
Sbjct: 170 DPLNSCSQPAAPGGQPIPDI 189
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 20.6 bits (41), Expect = 4.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 240 TENKTLSRKHTKRISDNGRKS 302
T N+ TKR+SDN R +
Sbjct: 18 TNNQIEMAAATKRVSDNRRSN 38
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 19.8 bits (39), Expect = 8.6
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = +1
Query: 205 TFNAFSKSRAF*LKTRPYQGSIQNASPTMGERARGLVSGR 324
TF SKS L+ I+N T+ + ++ GR
Sbjct: 740 TFTELSKSLEGLLENVAQYLQIENVEQTLNHEIKKVIPGR 779
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,354
Number of Sequences: 336
Number of extensions: 1840
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 7087595
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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