Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20881
         (355 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003200-1|AAO24955.1|  881|Drosophila melanogaster RE52776p pro...    28   3.0  
AY051867-1|AAK93291.1|  507|Drosophila melanogaster LD36294p pro...    28   3.0  
AE013599-2980|AAM68400.1|  881|Drosophila melanogaster CG11055-P...    28   3.0  
AE013599-2979|AAF57495.1|  881|Drosophila melanogaster CG11055-P...    28   3.0  
AE013599-2978|AAF57494.1|  881|Drosophila melanogaster CG11055-P...    28   3.0  
BT011157-1|AAR82825.1|  202|Drosophila melanogaster AT24473p pro...    27   5.2  
AE013599-3766|AAM68287.1|  187|Drosophila melanogaster CG30178-P...    27   5.2  
BT003767-1|AAO41446.1|  315|Drosophila melanogaster RE29488p pro...    27   9.1  
AY075394-1|AAL68228.1|  652|Drosophila melanogaster LD27661p pro...    27   9.1  
AF200691-1|AAF23397.1| 1218|Drosophila melanogaster Dispatched p...    27   9.1  
AE014297-378|AAF51938.1| 1218|Drosophila melanogaster CG2019-PA ...    27   9.1  
AE014296-2835|AAN11718.1|  315|Drosophila melanogaster CG11905-P...    27   9.1  
AE014296-2834|AAN11717.1|  315|Drosophila melanogaster CG11905-P...    27   9.1  

>BT003200-1|AAO24955.1|  881|Drosophila melanogaster RE52776p
           protein.
          Length = 881

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -1

Query: 343 VXDGLLHGH*PTLVLFRPLSEMRFVCFLDKVL 248
           V DGL   + PTLV F P S  R +C +D +L
Sbjct: 493 VPDGLFLAYCPTLVSFVP-SPARLLCLMDPLL 523


>AY051867-1|AAK93291.1|  507|Drosophila melanogaster LD36294p
           protein.
          Length = 507

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -1

Query: 343 VXDGLLHGH*PTLVLFRPLSEMRFVCFLDKVL 248
           V DGL   + PTLV F P S  R +C +D +L
Sbjct: 119 VPDGLFLAYCPTLVSFVP-SPARLLCLMDPLL 149


>AE013599-2980|AAM68400.1|  881|Drosophila melanogaster CG11055-PC,
           isoform C protein.
          Length = 881

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -1

Query: 343 VXDGLLHGH*PTLVLFRPLSEMRFVCFLDKVL 248
           V DGL   + PTLV F P S  R +C +D +L
Sbjct: 493 VPDGLFLAYCPTLVSFVP-SPARLLCLMDPLL 523


>AE013599-2979|AAF57495.1|  881|Drosophila melanogaster CG11055-PB,
           isoform B protein.
          Length = 881

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -1

Query: 343 VXDGLLHGH*PTLVLFRPLSEMRFVCFLDKVL 248
           V DGL   + PTLV F P S  R +C +D +L
Sbjct: 493 VPDGLFLAYCPTLVSFVP-SPARLLCLMDPLL 523


>AE013599-2978|AAF57494.1|  881|Drosophila melanogaster CG11055-PA,
           isoform A protein.
          Length = 881

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = -1

Query: 343 VXDGLLHGH*PTLVLFRPLSEMRFVCFLDKVL 248
           V DGL   + PTLV F P S  R +C +D +L
Sbjct: 493 VPDGLFLAYCPTLVSFVP-SPARLLCLMDPLL 523


>BT011157-1|AAR82825.1|  202|Drosophila melanogaster AT24473p
           protein.
          Length = 202

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 128 ARRNWFQSCFRCLSYCKN 75
           A R W + CFRC+S  K+
Sbjct: 95  AERKWHEKCFRCVSCSKS 112


>AE013599-3766|AAM68287.1|  187|Drosophila melanogaster CG30178-PA
           protein.
          Length = 187

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 128 ARRNWFQSCFRCLSYCKN 75
           A R W + CFRC+S  K+
Sbjct: 80  AERKWHEKCFRCVSCSKS 97


>BT003767-1|AAO41446.1|  315|Drosophila melanogaster RE29488p
           protein.
          Length = 315

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 81  TVAQAAKATLKPISACCNIPELGNPEPLAECSNPKLPGPCK 203
           T+A A +AT+   +        G PE LA+ S+ +L  P K
Sbjct: 92  TIASADQATIASATTTTTTTTTGRPESLADDSSSELEKPEK 132


>AY075394-1|AAL68228.1|  652|Drosophila melanogaster LD27661p
           protein.
          Length = 652

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 224 FENALNVLARSRQLWVGTFCE 162
           ++N  NV +R  QLW+  FC+
Sbjct: 196 YDNNFNVSSRPAQLWILDFCQ 216


>AF200691-1|AAF23397.1| 1218|Drosophila melanogaster Dispatched
           protein.
          Length = 1218

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 224 FENALNVLARSRQLWVGTFCE 162
           ++N  NV +R  QLW+  FC+
Sbjct: 762 YDNNFNVSSRPAQLWILDFCQ 782


>AE014297-378|AAF51938.1| 1218|Drosophila melanogaster CG2019-PA
           protein.
          Length = 1218

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 224 FENALNVLARSRQLWVGTFCE 162
           ++N  NV +R  QLW+  FC+
Sbjct: 762 YDNNFNVSSRPAQLWILDFCQ 782


>AE014296-2835|AAN11718.1|  315|Drosophila melanogaster CG11905-PE,
           isoform E protein.
          Length = 315

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 81  TVAQAAKATLKPISACCNIPELGNPEPLAECSNPKLPGPCK 203
           T+A A +AT+   +        G PE LA+ S+ +L  P K
Sbjct: 92  TIASADQATIASATTTTTTTTTGRPESLADDSSSELEKPEK 132


>AE014296-2834|AAN11717.1|  315|Drosophila melanogaster CG11905-PC,
           isoform C protein.
          Length = 315

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 81  TVAQAAKATLKPISACCNIPELGNPEPLAECSNPKLPGPCK 203
           T+A A +AT+   +        G PE LA+ S+ +L  P K
Sbjct: 92  TIASADQATIASATTTTTTTTTGRPESLADDSSSELEKPEK 132


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,347,006
Number of Sequences: 53049
Number of extensions: 335458
Number of successful extensions: 1241
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 859222404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)