Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20880
(579 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos t... 97 2e-19
UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse tr... 96 6e-19
UniRef50_UPI0000F32779 Cluster: UPI0000F32779 related cluster; n... 93 6e-18
UniRef50_UPI0000E4635A Cluster: PREDICTED: similar to reverse tr... 86 7e-16
UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse tr... 83 6e-15
UniRef50_UPI0000E4A090 Cluster: PREDICTED: similar to reverse tr... 82 1e-14
UniRef50_UPI0000F33B2A Cluster: UPI0000F33B2A related cluster; n... 66 6e-10
UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to endonuclea... 64 3e-09
UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to endonuclea... 62 7e-09
UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclea... 58 2e-07
UniRef50_UPI00015557D7 Cluster: PREDICTED: similar to reverse tr... 54 2e-06
UniRef50_Q4QQE8 Cluster: Endonuclease-reverse transcriptase; n=4... 54 3e-06
UniRef50_UPI0000E495D7 Cluster: PREDICTED: similar to endonuclea... 53 4e-06
UniRef50_UPI0000E4A747 Cluster: PREDICTED: similar to endonuclea... 53 6e-06
UniRef50_UPI0000E48AC5 Cluster: PREDICTED: similar to novel EGF ... 52 7e-06
UniRef50_UPI0000F329BA Cluster: LOC534369 protein; n=1; Bos taur... 50 5e-05
UniRef50_Q8T5G5 Cluster: Polyprotein; n=35; Schistosoma japonicu... 48 1e-04
UniRef50_UPI0000F31248 Cluster: UPI0000F31248 related cluster; n... 42 0.011
UniRef50_UPI0000E4898C Cluster: PREDICTED: similar to fibropelli... 38 0.17
UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core eudico... 38 0.17
UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu... 38 0.17
UniRef50_Q754X0 Cluster: AFL054Cp; n=1; Eremothecium gossypii|Re... 37 0.39
UniRef50_UPI0000F30BC1 Cluster: Eomesodermin; n=22; Bos taurus|R... 36 0.69
UniRef50_UPI0000E4A93D Cluster: PREDICTED: similar to endonuclea... 35 1.2
UniRef50_UPI0000E496F7 Cluster: PREDICTED: similar to endonuclea... 34 2.1
UniRef50_Q1GGJ2 Cluster: Flavin reductase-like FMN-binding; n=1;... 34 2.1
UniRef50_UPI0000E46DA5 Cluster: PREDICTED: hypothetical protein;... 33 4.9
UniRef50_Q5EFD3 Cluster: Sf3b complex subunit; n=5; Trypanosomat... 33 4.9
UniRef50_UPI0000F34067 Cluster: UPI0000F34067 related cluster; n... 33 6.4
UniRef50_A1DFL9 Cluster: C2H2 finger domain protein, putative; n... 33 6.4
>UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos
taurus|Rep: Reverse transcriptase-like - Bos taurus
(Bovine)
Length = 335
Score = 97.5 bits (232), Expect = 2e-19
Identities = 39/84 (46%), Positives = 58/84 (69%)
Frame = +1
Query: 1 VRRRIGMAKGAMTQLGKIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVDA 180
++RR+ + + MT L I + +IT FS+ +YG ++WT+K A+R+R+DA
Sbjct: 158 IKRRLLLGRKVMTHLNSILKSRDITLPTKVRLVKAMVFSVVMYGCKSWTIKKAERQRMDA 217
Query: 181 FEMWCWRRMLRIPWTAKRSNQSIL 252
FE+WCWRR+LR+PWTA+RS QSIL
Sbjct: 218 FELWCWRRLLRVPWTARRSTQSIL 241
Score = 59.7 bits (138), Expect = 5e-08
Identities = 29/71 (40%), Positives = 40/71 (56%)
Frame = +3
Query: 276 LSTLCLRRALEYFGHIARKTPDSLERLFVSGKIEGKRPRGRSPTRWFDQIRTTLEIPFHD 455
L L L+ L+YFGH+ R+ DSLE+ + GKIEG+R RGR RW D I ++++
Sbjct: 250 LEGLMLKLKLQYFGHLMRRA-DSLEKTLMLGKIEGRRRRGRQRMRWLDGIINSMDMGLGG 308
Query: 456 ALHAANDRRRW 488
DR W
Sbjct: 309 LRELVMDRETW 319
>UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Danio rerio|Rep: PREDICTED:
similar to reverse transcriptase-like - Danio rerio
Length = 249
Score = 95.9 bits (228), Expect = 6e-19
Identities = 37/91 (40%), Positives = 59/91 (64%)
Frame = +1
Query: 1 VRRRIGMAKGAMTQLGKIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVDA 180
+R+RI + + AM + K+W+ I+ F IF+Y E+WTLK DR+++DA
Sbjct: 90 IRQRIALGRSAMQGMEKVWKSKVISIVTKIRIINAIVFPIFMYACESWTLKKKDRRKIDA 149
Query: 181 FEMWCWRRMLRIPWTAKRSNQSILDNCRSRL 273
FE+WCWR+M+RIPW AK +N++IL+ + +
Sbjct: 150 FELWCWRQMMRIPWAAKITNKTILERVKQNV 180
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +3
Query: 294 RRALEYFGHIARKTPDSLERLFVSGKIEGKRPRGRSPTRWFDQIRTTLEIPFHDALHAAN 473
++ L +FGHI + +S+E F G + G R RGR TRW D I+T + + A
Sbjct: 188 KQRLSFFGHIMQT--NSMETAFTLGAVSGSRRRGRQRTRWLDTIKTDTNLNMEELKEAVR 245
Query: 474 DRR 482
+R+
Sbjct: 246 NRK 248
>UniRef50_UPI0000F32779 Cluster: UPI0000F32779 related cluster; n=9;
Bos taurus|Rep: UPI0000F32779 UniRef100 entry - Bos
Taurus
Length = 263
Score = 92.7 bits (220), Expect = 6e-18
Identities = 37/84 (44%), Positives = 57/84 (67%)
Frame = +1
Query: 1 VRRRIGMAKGAMTQLGKIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVDA 180
++RR+ + + MT L I++ +IT F + ++G E+WT+K A+ +R+DA
Sbjct: 84 IKRRLLLERKVMTNLDSIFKSRDITLPTKVCLVKAMVFPLVVHGCESWTVKKAEGQRIDA 143
Query: 181 FEMWCWRRMLRIPWTAKRSNQSIL 252
FE+WCWRR+LR+PWT +RSNQSIL
Sbjct: 144 FELWCWRRLLRVPWTERRSNQSIL 167
Score = 33.1 bits (72), Expect = 4.9
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +3
Query: 276 LSTLCLRRALEYFGHIARKTPDSLERLFVSGKIEGKRPRGRSPTRWFDQIRTTLEIPFHD 455
L + L+ L+YFGH+ + DSLE+ +G+ G+ RG + D+I ++++ +
Sbjct: 176 LEEIMLKLKLQYFGHLMQSV-DSLEKT-DAGRYWGQEERGTTEDEMADRITDSMDVSLSE 233
Query: 456 A 458
+
Sbjct: 234 S 234
>UniRef50_UPI0000E4635A Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like - Strongylocentrotus purpuratus
Length = 281
Score = 85.8 bits (203), Expect = 7e-16
Identities = 35/91 (38%), Positives = 55/91 (60%)
Frame = +1
Query: 1 VRRRIGMAKGAMTQLGKIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVDA 180
+RRR+ MA+ + + IW+ ++ FSI YG+E+W + DRKRVDA
Sbjct: 148 IRRRMAMARSTVQNMSHIWKSRGLSLSLKVRLLQATSFSIATYGSESWAMTKNDRKRVDA 207
Query: 181 FEMWCWRRMLRIPWTAKRSNQSILDNCRSRL 273
FEMWC+RR+L++ W K++N +L+ R+ L
Sbjct: 208 FEMWCYRRLLQVSWKDKKTNVWVLEKIRTDL 238
Score = 37.9 bits (84), Expect = 0.17
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 291 LRRALEYFGHIARKTPDSLERLFVSGKIEGKRPRG 395
+ R L YFGHI R++ + +E+ + G +EGKR RG
Sbjct: 245 MERKLYYFGHIVRRS-EGIEKQILQGAVEGKRGRG 278
>UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse
transcriptase-like; n=6; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like - Strongylocentrotus purpuratus
Length = 415
Score = 82.6 bits (195), Expect = 6e-15
Identities = 38/92 (41%), Positives = 51/92 (55%)
Frame = +1
Query: 1 VRRRIGMAKGAMTQLGKIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVDA 180
++ RI +AK M L +W D NI+ +S LYGAE+WTL AD R+ A
Sbjct: 231 IKIRIAIAKKRMVDLHVLWNDRNISTGLKIKLVKTLVWSALLYGAESWTLLKADENRIMA 290
Query: 181 FEMWCWRRMLRIPWTAKRSNQSILDNCRSRLD 276
EMW WR+ML+I W KR+N S+L + D
Sbjct: 291 AEMWFWRKMLKISWKDKRTNLSVLQELNTERD 322
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = +3
Query: 294 RRALEYFGHIARKTPDSLERLFVSGKIEGKRPRGRSPTRWFDQIRTTLEIPFHDALHAAN 473
R L YFGHI R + L + ++EGKR RGR +WFD I+ + + +A A
Sbjct: 329 RLKLGYFGHILRGSGSPLAAQIIESQVEGKRKRGRQRKQWFDNIKEWTGLTYTEAKRLAQ 388
Query: 474 DRRRWRDITR 503
DR WR TR
Sbjct: 389 DRNNWRKTTR 398
>UniRef50_UPI0000E4A090 Cluster: PREDICTED: similar to reverse
transcriptase-like; n=4; Deuterostomia|Rep: PREDICTED:
similar to reverse transcriptase-like -
Strongylocentrotus purpuratus
Length = 565
Score = 81.8 bits (193), Expect = 1e-14
Identities = 32/85 (37%), Positives = 52/85 (61%)
Frame = +1
Query: 1 VRRRIGMAKGAMTQLGKIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVDA 180
+RRR+ MA+ + + IW+ ++ F+I YG+E+W + DRKRVDA
Sbjct: 126 IRRRMAMARSTVQNMSHIWKSRGLSLNLKVRLLQATSFTIATYGSESWAMTKNDRKRVDA 185
Query: 181 FEMWCWRRMLRIPWTAKRSNQSILD 255
FEMWC+RR+L++ W K++N +L+
Sbjct: 186 FEMWCYRRLLQVSWKDKKTNVWVLE 210
>UniRef50_UPI0000F33B2A Cluster: UPI0000F33B2A related cluster; n=3;
Bos taurus|Rep: UPI0000F33B2A UniRef100 entry - Bos
Taurus
Length = 253
Score = 66.1 bits (154), Expect = 6e-10
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 VRRRIGMAKGAMTQLG---KIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKR 171
++R + + + AMT L K R H++ + F + +YG ++ K A+ ++
Sbjct: 84 IKRHLLLGRKAMTNLDSYIKKQRHHSVDKVKAMI------FPVVMYGCKS-NHKKAECRK 136
Query: 172 VDAFEMWCWRRMLRIPWTAKRSNQSIL 252
D FE+WCWRR+LR+PWTA RSNQSIL
Sbjct: 137 TDVFELWCWRRLLRVPWTAGRSNQSIL 163
Score = 49.2 bits (112), Expect = 7e-05
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +3
Query: 276 LSTLCLRRALEYFGHIARKTPDSLERLFVSGKIEGKRPRGRSPTRWFDQIRTTLEI 443
L + L+ L+YFGH + DSLE+ + GKIEGKR RG+ +W D I ++++
Sbjct: 172 LEGMMLKLKLQYFGH---RRADSLEKTLMLGKIEGKRRRGQKRMKWLDGITNSMDM 224
>UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 958
Score = 63.7 bits (148), Expect = 3e-09
Identities = 32/72 (44%), Positives = 38/72 (52%)
Frame = +1
Query: 1 VRRRIGMAKGAMTQLGKIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVDA 180
V+ RIG A GA L KIW +I SI LYGAETWTLK D R+
Sbjct: 759 VKHRIGKAIGAFQALKKIWASQDIRCSTKVDLYKVLVLSILLYGAETWTLKKVDENRLHT 818
Query: 181 FEMWCWRRMLRI 216
FEM C RR++ +
Sbjct: 819 FEMACLRRIMGV 830
Score = 56.4 bits (130), Expect = 5e-07
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +3
Query: 255 QLQIKTRLSTLCLRRALEYFGHIARKTPDSLERLFVSGKIEGKRPRGRSPTRWFDQIRTT 434
QL ++ + + L YFGHI R + ++G I GKRPRGR RW D I+
Sbjct: 844 QLNMEETIIDRVATKRLRYFGHINRMNSKRYPHILLNGNIHGKRPRGRPAKRWTDCIKAD 903
Query: 435 LEIPFHDALHAA----NDRRRWRDITRSKSCRI-IMVTTLSS 545
+ D+L A DR+ W+ I + K I +MV T S
Sbjct: 904 CKNRQVDSLTKATRLTEDRKVWQAIVKQKPSYIPVMVWTAKS 945
>UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1030
Score = 62.5 bits (145), Expect = 7e-09
Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +3
Query: 297 RALEYFGHIARKTPDSLERLFVSGKIEGKRPRGRSPTRWFDQIRTTLE---IP-FHDALH 464
+ ++YFGH+ R P ++ V GK+ G RPRGR P RW D I + IP DA
Sbjct: 945 KRIKYFGHVLRMKPTRYPKIAVEGKVTGNRPRGRPPKRWLDCISEDCKARSIPRLTDASR 1004
Query: 465 AANDRRRWRDITRSKSCR 518
A DR+ W IT K R
Sbjct: 1005 LAADRKTWHTITIQKPSR 1022
Score = 57.2 bits (132), Expect = 3e-07
Identities = 29/86 (33%), Positives = 42/86 (48%)
Frame = +1
Query: 1 VRRRIGMAKGAMTQLGKIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVDA 180
++ RI A A +L IW +I+ SI LYGAE+WT+K D R+
Sbjct: 846 IKNRIRKAGAAFQRLNNIWTSKSISSHTKMQLYQSLILSILLYGAESWTVKKEDSNRLQV 905
Query: 181 FEMWCWRRMLRIPWTAKRSNQSILDN 258
FEM C RR++ + K N I ++
Sbjct: 906 FEMACLRRIMGVTRLDKIRNTHIKES 931
>UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase, partial; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 787
Score = 57.6 bits (133), Expect = 2e-07
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Frame = +3
Query: 252 RQLQIKTRL---STLC---LRRALEYFGHIARKTPDSLERLFVSGKIEGKRPRGRSPTRW 413
R +I+ RL ST+C +R L++FGH+ R L G+RPRGR P RW
Sbjct: 424 RNEEIRQRLNIPSTICEEITKRCLKWFGHVLRMPHHRLPYQAFQNDFNGRRPRGRPPKRW 483
Query: 414 FDQIRTTLEIPFHDALHAANDRRRWRDITR 503
DQ++ + + +A A DR W I+R
Sbjct: 484 KDQVQYDVGLSTQEAEQRAQDRSDWNMISR 513
Score = 53.6 bits (123), Expect = 3e-06
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 VRRRIGMAKGAMTQL-GKIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVD 177
V+RR +A A +L IW + +I++ I YGAE+WTL+ +DR +++
Sbjct: 345 VKRRTRLAAWAFGRLKSAIWSNQDISRSLKVRIYRALILPIATYGAESWTLRKSDRNKLE 404
Query: 178 AFEMWCWRRMLRIPWTAKRSNQSILDNCRSRLDCP 282
FEM C R +L + K N+ I R RL+ P
Sbjct: 405 VFEMRCLRTILGVHLMDKIRNEEI----RQRLNIP 435
>UniRef50_UPI00015557D7 Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to reverse transcriptase-like -
Ornithorhynchus anatinus
Length = 176
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +1
Query: 127 YGAETWTLKAADRKRVDAFEMWCWRRMLRIPWTAKRSNQSILDNCRSR 270
YG+E+ T+K R+ VD+FE W WRR+LRIP A R+N+ IL + +
Sbjct: 123 YGSESRTVKGRGRRNVDSFETWGWRRLLRIPRAAHRTNKWILQQMKPK 170
>UniRef50_Q4QQE8 Cluster: Endonuclease-reverse transcriptase; n=43;
Eumetazoa|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 992
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/81 (34%), Positives = 39/81 (48%)
Frame = +1
Query: 1 VRRRIGMAKGAMTQLGKIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVDA 180
VR RIG A+ A QL IW ++ ++ LYGAETW A +++
Sbjct: 812 VRARIGKARAAYLQLKNIWSSKQLSTNTKVRIFNTNVKTVLLYGAETWRTTKAIIQKIQV 871
Query: 181 FEMWCWRRMLRIPWTAKRSNQ 243
F C R++LRI W SN+
Sbjct: 872 FINSCLRKILRIRWPDTISNK 892
>UniRef50_UPI0000E495D7 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Deuterostomia|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 604
Score = 53.2 bits (122), Expect = 4e-06
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 RRIGMAKGAMTQLG-KIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVDAF 183
+R+ A A +L ++W +H+++ S LYGAE+WTL + K++ AF
Sbjct: 435 KRMSKASSAFGRLRTRLWNNHHVSTRVKCKICRAIVLSTLLYGAESWTLYTSQVKKLHAF 494
Query: 184 EMWCWRRMLRIPWTAKRSNQSILD 255
M R ++RI W K +N+ +L+
Sbjct: 495 MMRHLRAIMRISWKDKVTNKEVLE 518
>UniRef50_UPI0000E4A747 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 555
Score = 52.8 bits (121), Expect = 6e-06
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 RRIGMAKGAMTQLG-KIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVDAF 183
+R+ A A +L ++W +H+++ S LYGAE+WTL + K++ AF
Sbjct: 386 KRMSKASSAFGRLRTRLWNNHHVSTRVKCKIYRAIVLSTLLYGAESWTLYKSQVKKLHAF 445
Query: 184 EMWCWRRMLRIPWTAKRSNQSILD 255
M R ++RI W K +N+ +L+
Sbjct: 446 MMRHLRAIMRISWKDKVTNKEVLE 469
>UniRef50_UPI0000E48AC5 Cluster: PREDICTED: similar to novel EGF
domain containing protein; n=2; Eumetazoa|Rep:
PREDICTED: similar to novel EGF domain containing
protein - Strongylocentrotus purpuratus
Length = 3832
Score = 52.4 bits (120), Expect = 7e-06
Identities = 27/69 (39%), Positives = 36/69 (52%)
Frame = +1
Query: 1 VRRRIGMAKGAMTQLGKIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVDA 180
V RI K A+T+L IW + NIT SIFL ETWT+ A +R+ A
Sbjct: 41 VLSRIAQTKAAVTKLKVIWTNKNITISSKIRLMRSLVISIFLDACETWTITADIGRRIQA 100
Query: 181 FEMWCWRRM 207
EM C+R++
Sbjct: 101 LEMRCFRKL 109
>UniRef50_UPI0000F329BA Cluster: LOC534369 protein; n=1; Bos
taurus|Rep: LOC534369 protein - Bos Taurus
Length = 87
Score = 49.6 bits (113), Expect = 5e-05
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 285 LCLRRALEYFGHIARKTPDSLERLFVSGKIEGKRPRGRSPTRWFDQIRTTLEIPFHDALH 464
+ L+ L+YFGH+ R+ DSLE+ + G I GKR GR RW + I + ++ +
Sbjct: 1 MMLKLKLQYFGHLMRRV-DSLEKTLMLGGIGGKRRSGRQRMRWLNDITDSNDVSLSELRE 59
Query: 465 -AANDRRRW 488
AA RR W
Sbjct: 60 LAAPPRRTW 68
>UniRef50_Q8T5G5 Cluster: Polyprotein; n=35; Schistosoma
japonicum|Rep: Polyprotein - Schistosoma japonicum (Blood
fluke)
Length = 1091
Score = 48.4 bits (110), Expect = 1e-04
Identities = 24/80 (30%), Positives = 36/80 (45%)
Frame = +1
Query: 1 VRRRIGMAKGAMTQLGKIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVDA 180
+ RI A+ A L +WR +I S+ YG ETW L+ D +R+
Sbjct: 893 ISARIHKARSAFANLRHLWRRRDIRLMTKGRVYCAAVRSVLPYGCETWPLRVEDIRRILV 952
Query: 181 FEMWCWRRMLRIPWTAKRSN 240
F+ C R + R+ W + SN
Sbjct: 953 FDHRCLRNIARVCWDNRVSN 972
>UniRef50_UPI0000F31248 Cluster: UPI0000F31248 related cluster; n=2;
Bos taurus|Rep: UPI0000F31248 UniRef100 entry - Bos
Taurus
Length = 313
Score = 41.9 bits (94), Expect = 0.011
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +3
Query: 315 GHIARKTPDSLERLFVSGKIEGKRPRGRSPTRWFDQIRTTLEI 443
GH+ ++T DSLE+ + GKIEG+R R R RW D I ++++
Sbjct: 263 GHLMQRT-DSLEKTLMLGKIEGRRRRVRQRMRWLDGITDSMDM 304
>UniRef50_UPI0000E4898C Cluster: PREDICTED: similar to fibropellin
Ia; n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to fibropellin Ia - Strongylocentrotus
purpuratus
Length = 1096
Score = 37.9 bits (84), Expect = 0.17
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 345 LERLFVSGKIEGKRPRGRSPTRWFDQIRTTLEIPFHDALHAA----NDRRRWRDITRSKS 512
+ + ++ + GK PRGR RW D I+ D+L A DR+ WR I + K
Sbjct: 13 IPHILLNENVHGKHPRGRPAKRWTDCIKADCNNRQVDSLTKATRLTEDRKVWRTIVKQKP 72
Query: 513 CRIIMVTTLSSE 548
I M + E
Sbjct: 73 SYITMKNRIHME 84
>UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core
eudicotyledons|Rep: Polyprotein, putative - Solanum
demissum (Wild potato)
Length = 868
Score = 37.9 bits (84), Expect = 0.17
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 291 LRRA-LEYFGHIARKTPDSLERLFVSGKIEG-KRPRGRSPTRWFDQIRTTLEIPFHDALH 464
LR A L +FGH+ R++ D+ R +EG +R RGR W + IR L + H
Sbjct: 617 LREARLRWFGHVKRRSADAPVRRCEVMVVEGTRRGRGRPKKYWEEVIRQDLAM-LHITED 675
Query: 465 AANDRRRWR 491
DR+ WR
Sbjct: 676 MTLDRKEWR 684
>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
nubilalis|Rep: Reverse transcriptase - Ostrinia
nubilalis (European corn borer)
Length = 497
Score = 37.9 bits (84), Expect = 0.17
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 255 QLQIKTRLSTLCLRRAL---EYFGHIARKTPDSLERLFVSGKIE-GKRPRGRSPTRWFDQ 422
+++ +TR++ + R A ++ GHIAR+ R + + G+R GR PTRW D
Sbjct: 404 EIRRRTRVTDIARRIAKIKWQWAGHIARRADGRWGRKVLEWRPRAGRRSVGRPPTRWTDD 463
Query: 423 IRTTLEIPFHDALHAANDRRRWRDI 497
+ +++ + AA DR W+ +
Sbjct: 464 L---VKVAGSTWMQAAQDRSLWKSL 485
>UniRef50_Q754X0 Cluster: AFL054Cp; n=1; Eremothecium gossypii|Rep:
AFL054Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 684
Score = 36.7 bits (81), Expect = 0.39
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 367 GRSRERDRA-GAVRQGGSTKSAPH*RSHSTTPFMRPMIGGAGGTSQGVNHVEL*WSRPSA 543
GR D A G +GG+ ++AP + P + + GAGG++QG+ ++L + PS+
Sbjct: 152 GRWGAGDEAEGDEAEGGAARAAPALPALPALPALPALPAGAGGSTQGLGRMQLSYKAPSS 211
Query: 544 VR 549
+R
Sbjct: 212 LR 213
>UniRef50_UPI0000F30BC1 Cluster: Eomesodermin; n=22; Bos taurus|Rep:
Eomesodermin - Bos Taurus
Length = 324
Score = 35.9 bits (79), Expect = 0.69
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 1 VRRRIGMAKGAMTQLGKIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLK 153
++RR+ + + AMT L I + +IT + +YG E+WT+K
Sbjct: 159 IKRRLLLGRKAMTNLDSILKSRDITLPTNVHLVKSMVLPVLMYGCESWTIK 209
>UniRef50_UPI0000E4A93D Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1253
Score = 35.1 bits (77), Expect = 1.2
Identities = 20/86 (23%), Positives = 36/86 (41%)
Frame = +1
Query: 1 VRRRIGMAKGAMTQLGKIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVDA 180
V+ R A A ++LG+IW+ ++ + S+ LYG E W + K +D
Sbjct: 1082 VKARKSAAWRACSKLGRIWKS-SLPRQFKQRLFVATVESVLLYGCEAWAVTTKLAKELDG 1140
Query: 181 FEMWCWRRMLRIPWTAKRSNQSILDN 258
R + W+ +N+ + N
Sbjct: 1141 CYTRLLRTAFNVHWSQHITNKELYGN 1166
>UniRef50_UPI0000E496F7 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 890
Score = 34.3 bits (75), Expect = 2.1
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +1
Query: 31 AMTQLGKIWRDHNITQXXXXXXXXXXXFSIFLYGAETWTLKAADRKRVDAFEMWCWRRML 210
A+ +L IW+ N+ + ++ LYG+E WTL ++ K++D R L
Sbjct: 745 ALNKLTAIWKS-NLGRKLKVRFFRASVETVLLYGSEAWTLTSSLAKQLDGCYTRLLRAAL 803
Query: 211 RIPWTAKRSN 240
+ W+ +N
Sbjct: 804 NVNWSDHMTN 813
>UniRef50_Q1GGJ2 Cluster: Flavin reductase-like FMN-binding; n=1;
Silicibacter sp. TM1040|Rep: Flavin reductase-like
FMN-binding - Silicibacter sp. (strain TM1040)
Length = 166
Score = 34.3 bits (75), Expect = 2.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 217 PWTAKRSNQSILDNCRSRLDCPHSAFAAHSSTSVILLGK 333
PW+ NQ +LD+ RLDC H A A IL+G+
Sbjct: 103 PWSRNTQNQPVLDDAMVRLDCAHHA-AHPGGDHTILVGE 140
>UniRef50_UPI0000E46DA5 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 732
Score = 33.1 bits (72), Expect = 4.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 265 SRLDCPHSAFAAHSSTSVILLGKHRIA*KDYSCQGRSRE 381
SR DCP + + ++++ G H I+ D CQ R ++
Sbjct: 403 SRCDCPRGHYKCSHAATLVIFGIHNISRTDVECQWRKKK 441
>UniRef50_Q5EFD3 Cluster: Sf3b complex subunit; n=5;
Trypanosomatidae|Rep: Sf3b complex subunit - Trypanosoma
cruzi
Length = 89
Score = 33.1 bits (72), Expect = 4.9
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +3
Query: 192 VLAKNASDTLDSEEKQPVYFRQLQIKTRLSTLCLRRALEYFGHIARKTPDSLERLFVSGK 371
VL +N TL E + + R T S + R LEY + P +ER+ +
Sbjct: 19 VLLRNEG-TLTLESSKDDWLRYQHRDTLASLILHRDRLEYLSLVENVAPARMERILLERA 77
Query: 372 IEGKRPRGRSPT 407
++ R RGRS T
Sbjct: 78 VDPIRKRGRSNT 89
>UniRef50_UPI0000F34067 Cluster: UPI0000F34067 related cluster; n=1;
Bos taurus|Rep: UPI0000F34067 UniRef100 entry - Bos
Taurus
Length = 129
Score = 32.7 bits (71), Expect = 6.4
Identities = 20/64 (31%), Positives = 36/64 (56%)
Frame = +3
Query: 252 RQLQIKTRLSTLCLRRALEYFGHIARKTPDSLERLFVSGKIEGKRPRGRSPTRWFDQIRT 431
+++ + L L L L+YFGH+ R+ +SLE+ + + EG R R + RW D I
Sbjct: 41 KEINFEFSLEGLMLTLKLQYFGHLMRRA-NSLEK---TDETEG-RGRKQHRMRWLDDIID 95
Query: 432 TLEI 443
++++
Sbjct: 96 SMDM 99
>UniRef50_A1DFL9 Cluster: C2H2 finger domain protein, putative; n=7;
Trichocomaceae|Rep: C2H2 finger domain protein, putative
- Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
NRRL 181)(Aspergillus fischerianus (strain ATCC 1020 /
DSM 3700 / NRRL 181))
Length = 442
Score = 32.7 bits (71), Expect = 6.4
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Frame = +3
Query: 213 DTLDSEEKQPVYFRQLQIKTRL---STLCLRRALEYFGHIARKTPDSLERL-----FVSG 368
D DS K PV + Q + + L ++ R +Y+ P ER+ +G
Sbjct: 309 DDFDSHRKAPVVY-QTEYELHLPSGKSVGHRSLAKYYRQNLHNYPSMEERIARQLAIENG 367
Query: 369 KIEGKRPRGRSPTR 410
++E +RPRGR+PTR
Sbjct: 368 EVEEERPRGRNPTR 381
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,772,384
Number of Sequences: 1657284
Number of extensions: 14544127
Number of successful extensions: 40843
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40827
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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