Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20880
         (579 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          26   0.77 
AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione tranfe...    24   3.1  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   7.2  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   7.2  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   7.2  
AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14...    23   9.5  

>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 204 NASDTLDSEEKQPVYFRQLQIKTRLSTLCLR--RALEYFGHIARKTPDSLERLFV 362
           N     +   +QP +FRQLQ  T L+T+ L+  R  + F   A   P   +RL V
Sbjct: 285 NFKQAAELAARQPQHFRQLQ--TSLATIELKHWRKFDRFVPYANALPQPAQRLEV 337


>AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione
           tranferase d9 protein.
          Length = 216

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 140 PGPLKQLIANAWMLLRCGAGEEC 208
           P PL++ I N  +L  CG   +C
Sbjct: 86  PDPLRRAIVNQRLLFECGTLYKC 108


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1

Query: 249 NRLVASLRCPRYPKHSSPAPHLKSIHAFAISCFKGPGLR 133
           N   AS   P +PKH++   H   +        +GP LR
Sbjct: 643 NPNTASSEFPEWPKHTAHGRHYLELGLNTSFVGRGPRLR 681


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1

Query: 249 NRLVASLRCPRYPKHSSPAPHLKSIHAFAISCFKGPGLR 133
           N   AS   P +PKH++   H   +        +GP LR
Sbjct: 643 NPNTASSEFPEWPKHTAHGRHYLELGLNTSFVGRGPRLR 681


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1

Query: 249 NRLVASLRCPRYPKHSSPAPHLKSIHAFAISCFKGPGLR 133
           N   AS   P +PKH++   H   +        +GP LR
Sbjct: 529 NPNTASSEFPEWPKHTAHGRHYLELGLNTSFVGRGPRLR 567


>AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14A
           protein.
          Length = 365

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 210 SDTLDSEEKQPVYFRQLQIKTRLSTLC 290
           SD + SE++   Y R+LQ KT+  T+C
Sbjct: 52  SDRVLSEDEID-YLRKLQCKTKDVTIC 77


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,150
Number of Sequences: 2352
Number of extensions: 14561
Number of successful extensions: 80
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)