Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20879
         (568 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   1.0  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   5.6  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   5.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   7.3  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.3  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   7.3  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -2

Query: 114 SSNAFRFEGWGSRCNYTETLELISQGVWRI 25
           + N+ ++ G      Y E +EL  +G W++
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 211 KNRMFCCFALFHLAIARKRL 270
           KN +  CF L+HLA    +L
Sbjct: 281 KNCLSYCFNLYHLASKSNQL 300


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 211 KNRMFCCFALFHLAIARKRL 270
           KN +  CF L+HLA    +L
Sbjct: 281 KNCLSYCFNLYHLASKSNQL 300


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 276 IFLKLSTRKFCFESNTYFFFMILVKI 353
           IFL     K C E+N   F    +KI
Sbjct: 151 IFLSFRCTKLCKEANKTAFLWYHIKI 176


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 292 LSLRKMSSIFSSQWQDETM 236
           L+LRK+   F ++W + T+
Sbjct: 466 LNLRKLVDQFGAEWAETTI 484


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 168 PLVSPHG*VPPP 133
           P V PH  VPPP
Sbjct: 12  PTVLPHQEVPPP 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,245
Number of Sequences: 336
Number of extensions: 2490
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)