Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20878
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   4.1  
AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...    22   4.1  
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...    22   4.1  
AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin pr...    22   4.1  
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...    22   4.1  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.5  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 2   NVIIFKFCTIFYRKK 46
           N I+F FC  +Y  K
Sbjct: 266 NTIVFSFCYCYYNSK 280


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 442 QYLNGLGAYQKINGNVHLMNKYKNQE*QLTWHCTLKYILFLLKLVIEGIL--DQPYRF 609
           +++N L  +     NV L+  Y+NQ  +   H  ++Y+     L+ +  +  +Q Y++
Sbjct: 104 EFINKLIEFDVKLQNVSLIINYENQRTRSRIHLFVRYVFVTSYLLFDYFVQRNQEYKY 161


>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
           protein.
          Length = 76

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 136 PPPRHDLLMNGPQLEDSDDENEY 204
           PP +  L+  G QLED    ++Y
Sbjct: 37  PPDQQRLIFAGKQLEDGRTLSDY 59


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 136 PPPRHDLLMNGPQLEDSDDENEY 204
           PP +  L+  G QLED    ++Y
Sbjct: 37  PPDQQRLIFAGKQLEDGRTLSDY 59



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 136 PPPRHDLLMNGPQLEDSDDENEY 204
           PP +  L+  G QLED    ++Y
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDY 135



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 136 PPPRHDLLMNGPQLEDSDDENEY 204
           PP +  L+  G QLED    ++Y
Sbjct: 189 PPDQQRLIFAGKQLEDGRTLSDY 211



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 136 PPPRHDLLMNGPQLEDSDDENEY 204
           PP +  L+  G QLED    ++Y
Sbjct: 265 PPDQQRLIFAGKQLEDGRTLSDY 287



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 136 PPPRHDLLMNGPQLEDSDDENEY 204
           PP +  L+  G QLED    ++Y
Sbjct: 341 PPDQQRLIFAGKQLEDGRTLSDY 363



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 136 PPPRHDLLMNGPQLEDSDDENEY 204
           PP +  L+  G QLED    ++Y
Sbjct: 493 PPDQQRLIFAGKQLEDGRTLSDY 515



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 136 PPPRHDLLMNGPQLEDSDDENEY 204
           PP +  L+  G QLED    ++Y
Sbjct: 569 PPDQQRLIFAGKQLEDGRTLSDY 591



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 136 PPPRHDLLMNGPQLEDSDDENEY 204
           PP +  L+  G QLED    ++Y
Sbjct: 645 PPDQQRLIFAGKQLEDGRTLSDY 667


>AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin
           protein.
          Length = 64

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 136 PPPRHDLLMNGPQLEDSDDENEY 204
           PP +  L+  G QLED    ++Y
Sbjct: 37  PPDQQRLIFAGKQLEDGRTLSDY 59


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 136 PPPRHDLLMNGPQLEDSDDENEY 204
           PP +  L+  G QLED    ++Y
Sbjct: 9   PPDQQRLIFAGKQLEDGRTLSDY 31


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -2

Query: 381 PFVLDHCFWVYSI 343
           P   +HC W+Y I
Sbjct: 93  PISTEHCDWLYGI 105


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 73   FWPKMVCDGPDPPENNP 123
            FW K  CD P+  E +P
Sbjct: 2270 FWNKDHCDWPENTECHP 2286


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 103 DPPENNPHELSPPPRHDLLMNGPQLEDSDDEN 198
           +P   NPH+++ P   + L       DS D N
Sbjct: 748 NPVGTNPHDINNPLSVNQLTGQCVRNDSSDTN 779


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 103 DPPENNPHELSPPPRHDLLMNGPQLEDSDDEN 198
           +P   NPH+++ P   + L       DS D N
Sbjct: 640 NPVGTNPHDINNPLSVNQLTGQCVRNDSSDTN 671


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,040
Number of Sequences: 336
Number of extensions: 3917
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)