Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20862
         (321 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   4.2  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    20   5.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   5.5  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    20   5.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   5.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   5.5  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    20   7.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   7.3  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 11/50 (22%), Positives = 21/50 (42%)
 Frame = +3

Query: 30  VTVCHSKTKNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAI 179
           V  C+ + K    +     ++V  + +P ++   W+     VID   N I
Sbjct: 150 VIQCYLEIKIDEHLYPVVALVVKNLIKPTILGADWLNEQRAVIDFDNNEI 199


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 241 TASWYATSPTKRCPLFF 191
           T SWYA     R  +FF
Sbjct: 116 TVSWYAGDAMCRIMMFF 132


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 250  ATLTASWYATSPTKR 206
            +T T+ W+ T+ T+R
Sbjct: 1045 STTTSPWWTTTTTRR 1059


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 241 TASWYATSPTKRCPLFF 191
           T SWYA     R  +FF
Sbjct: 116 TVSWYAGDAMCRIMMFF 132


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 72  TKTAEILVVAIGRPEMVRGSWIK 140
           T T   +++A+G   + R SW K
Sbjct: 138 TLTVVFMLIALGEHWLSRYSWAK 160


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 72  TKTAEILVVAIGRPEMVRGSWIK 140
           T T   +++A+G   + R SW K
Sbjct: 138 TLTVVFMLIALGEHWLSRYSWAK 160


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 5/18 (27%), Positives = 11/18 (61%)
 Frame = -2

Query: 86  FCCLSNFTQILSL*MAHC 33
           +CC  +F +  ++ + HC
Sbjct: 82  YCCRESFLRERTITLTHC 99


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 10/29 (34%), Positives = 11/29 (37%)
 Frame = +2

Query: 233 GGGQSSFAVTPVPGGXGPMTVAMLMRNTC 319
           GGG S       PGG      A+L    C
Sbjct: 525 GGGGSGSGNNQPPGGPSSHVSAVLTCKVC 553


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,330
Number of Sequences: 336
Number of extensions: 1314
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6048897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)