Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20862
         (321 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     24   1.6  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   3.7  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    21   8.6  

>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 209 FSGRRGIPGGGQSSFAVTPVPGGXGPMT 292
           F+ +   PG  +S   +TP PG  GP++
Sbjct: 436 FTAQSTSPGPDRSPATLTPSPGIGGPIS 463


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 161  VYNDGSRLDPRASDHLWTTDRHH 93
            VY DG+   P + +  W+ +R H
Sbjct: 1031 VYEDGNVDKPVSKERYWSRNRFH 1053


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 215 GRRGIPGGGQSSFAVTPVPG 274
           G  G+PG   S  +  P PG
Sbjct: 177 GASGVPGAEPSRGSTPPTPG 196


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 328,590
Number of Sequences: 2352
Number of extensions: 5296
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21613350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)