BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbS20862 (321 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT021278-1|AAX33426.1| 934|Drosophila melanogaster RE42943p pro... 128 1e-30 AF082097-1|AAC78847.1| 934|Drosophila melanogaster C1-THF synth... 128 1e-30 AE014297-1172|AAN13479.1| 934|Drosophila melanogaster CG4067-PC... 128 1e-30 AE014297-1171|AAN13478.1| 934|Drosophila melanogaster CG4067-PA... 128 1e-30 AE014297-1168|AAX52944.1| 968|Drosophila melanogaster CG4067-PD... 128 1e-30 AE014297-1167|AAG22140.2| 968|Drosophila melanogaster CG4067-PB... 128 1e-30 L07958-1|AAB41352.1| 357|Drosophila melanogaster NAD-dependent ... 71 3e-13 AY047498-1|AAK77230.1| 309|Drosophila melanogaster GH01066p pro... 71 3e-13 AF186073-5|AAF07930.1| 303|Drosophila melanogaster NMDMC isofor... 71 3e-13 AF186073-2|AAF07929.1| 309|Drosophila melanogaster NMDMC isofor... 71 3e-13 AE014297-868|AAF54332.1| 303|Drosophila melanogaster CG18466-PA... 71 3e-13 AE014297-867|AAN13408.1| 309|Drosophila melanogaster CG18466-PB... 71 3e-13 Y07567-1|CAA68852.1| 774|Drosophila melanogaster TF125 type II ... 27 4.1 X98235-1|CAA66887.1| 1182|Drosophila melanogaster TF125 protein. 27 4.1 AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p pro... 27 4.1 AE014297-3402|AAF56201.2| 1182|Drosophila melanogaster CG13598-P... 27 4.1 AE014297-3401|AAO41596.1| 1362|Drosophila melanogaster CG13598-P... 27 4.1 BT024229-1|ABC86291.1| 1428|Drosophila melanogaster LP01445p pro... 27 5.4 AY113465-1|AAM29470.1| 151|Drosophila melanogaster RE39820p pro... 26 9.4 AY095027-1|AAM11355.1| 1379|Drosophila melanogaster LD11664p pro... 26 9.4 AF038598-1|AAB92621.1| 151|Drosophila melanogaster small nuclea... 26 9.4 AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-P... 26 9.4 AE013599-1407|AAF58566.1| 151|Drosophila melanogaster CG8427-PA... 26 9.4 >BT021278-1|AAX33426.1| 934|Drosophila melanogaster RE42943p protein. Length = 934 Score = 128 bits (310), Expect = 1e-30 Identities = 60/83 (72%), Positives = 70/83 (84%) Frame = +3 Query: 3 ELLKWEHATVTVCHSKTKNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIE 182 ELLKW +ATVTVCHSKT+NL EIT++A+ILVV IG EMV+GSWIKPGAVVIDCGIN Sbjct: 182 ELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKP 241 Query: 183 DPTKKSGQRLVGDVAYQEAVKVA 251 D +K SG +LVGDV Y EA++VA Sbjct: 242 DASKASGSKLVGDVDYAEALQVA 264 Score = 41.5 bits (93), Expect = 2e-04 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +2 Query: 257 VTPVPGGXGPMTVAMLMRNT 316 +TPVPGG GPMTVAMLM+NT Sbjct: 267 LTPVPGGVGPMTVAMLMKNT 286 >AF082097-1|AAC78847.1| 934|Drosophila melanogaster C1-THF synthase homolog protein. Length = 934 Score = 128 bits (310), Expect = 1e-30 Identities = 60/83 (72%), Positives = 70/83 (84%) Frame = +3 Query: 3 ELLKWEHATVTVCHSKTKNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIE 182 ELLKW +ATVTVCHSKT+NL EIT++A+ILVV IG EMV+GSWIKPGAVVIDCGIN Sbjct: 182 ELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKP 241 Query: 183 DPTKKSGQRLVGDVAYQEAVKVA 251 D +K SG +LVGDV Y EA++VA Sbjct: 242 DASKASGSKLVGDVDYAEALQVA 264 Score = 41.5 bits (93), Expect = 2e-04 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +2 Query: 257 VTPVPGGXGPMTVAMLMRNT 316 +TPVPGG GPMTVAMLM+NT Sbjct: 267 LTPVPGGVGPMTVAMLMKNT 286 >AE014297-1172|AAN13479.1| 934|Drosophila melanogaster CG4067-PC, isoform C protein. Length = 934 Score = 128 bits (310), Expect = 1e-30 Identities = 60/83 (72%), Positives = 70/83 (84%) Frame = +3 Query: 3 ELLKWEHATVTVCHSKTKNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIE 182 ELLKW +ATVTVCHSKT+NL EIT++A+ILVV IG EMV+GSWIKPGAVVIDCGIN Sbjct: 182 ELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKP 241 Query: 183 DPTKKSGQRLVGDVAYQEAVKVA 251 D +K SG +LVGDV Y EA++VA Sbjct: 242 DASKASGSKLVGDVDYAEALQVA 264 Score = 41.5 bits (93), Expect = 2e-04 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +2 Query: 257 VTPVPGGXGPMTVAMLMRNT 316 +TPVPGG GPMTVAMLM+NT Sbjct: 267 LTPVPGGVGPMTVAMLMKNT 286 >AE014297-1171|AAN13478.1| 934|Drosophila melanogaster CG4067-PA, isoform A protein. Length = 934 Score = 128 bits (310), Expect = 1e-30 Identities = 60/83 (72%), Positives = 70/83 (84%) Frame = +3 Query: 3 ELLKWEHATVTVCHSKTKNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIE 182 ELLKW +ATVTVCHSKT+NL EIT++A+ILVV IG EMV+GSWIKPGAVVIDCGIN Sbjct: 182 ELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKP 241 Query: 183 DPTKKSGQRLVGDVAYQEAVKVA 251 D +K SG +LVGDV Y EA++VA Sbjct: 242 DASKASGSKLVGDVDYAEALQVA 264 Score = 41.5 bits (93), Expect = 2e-04 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +2 Query: 257 VTPVPGGXGPMTVAMLMRNT 316 +TPVPGG GPMTVAMLM+NT Sbjct: 267 LTPVPGGVGPMTVAMLMKNT 286 >AE014297-1168|AAX52944.1| 968|Drosophila melanogaster CG4067-PD, isoform D protein. Length = 968 Score = 128 bits (310), Expect = 1e-30 Identities = 60/83 (72%), Positives = 70/83 (84%) Frame = +3 Query: 3 ELLKWEHATVTVCHSKTKNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIE 182 ELLKW +ATVTVCHSKT+NL EIT++A+ILVV IG EMV+GSWIKPGAVVIDCGIN Sbjct: 216 ELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKP 275 Query: 183 DPTKKSGQRLVGDVAYQEAVKVA 251 D +K SG +LVGDV Y EA++VA Sbjct: 276 DASKASGSKLVGDVDYAEALQVA 298 Score = 41.5 bits (93), Expect = 2e-04 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +2 Query: 257 VTPVPGGXGPMTVAMLMRNT 316 +TPVPGG GPMTVAMLM+NT Sbjct: 301 LTPVPGGVGPMTVAMLMKNT 320 >AE014297-1167|AAG22140.2| 968|Drosophila melanogaster CG4067-PB, isoform B protein. Length = 968 Score = 128 bits (310), Expect = 1e-30 Identities = 60/83 (72%), Positives = 70/83 (84%) Frame = +3 Query: 3 ELLKWEHATVTVCHSKTKNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIE 182 ELLKW +ATVTVCHSKT+NL EIT++A+ILVV IG EMV+GSWIKPGAVVIDCGIN Sbjct: 216 ELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKP 275 Query: 183 DPTKKSGQRLVGDVAYQEAVKVA 251 D +K SG +LVGDV Y EA++VA Sbjct: 276 DASKASGSKLVGDVDYAEALQVA 298 Score = 41.5 bits (93), Expect = 2e-04 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +2 Query: 257 VTPVPGGXGPMTVAMLMRNT 316 +TPVPGG GPMTVAMLM+NT Sbjct: 301 LTPVPGGVGPMTVAMLMKNT 320 >L07958-1|AAB41352.1| 357|Drosophila melanogaster NAD-dependent methylenetetrahydrofolatedehydrogenase- methenyltetrahydrofolate cyclohydrolaseprotein. Length = 357 Score = 71.3 bits (167), Expect = 3e-13 Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 3/79 (3%) Frame = +3 Query: 24 ATVTVCHSKT--KNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIEDPTKK 197 ATVT+CH T K L+ + A+I+VVA+G+P ++ +KPGA VID GIN I+D + Sbjct: 245 ATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKD--ES 302 Query: 198 SGQ-RLVGDVAYQEAVKVA 251 +GQ +LVGDV ++E +VA Sbjct: 303 TGQFKLVGDVDFEEVRQVA 321 Score = 41.5 bits (93), Expect = 2e-04 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = +2 Query: 257 VTPVPGGXGPMTVAMLMRNT 316 +TPVPGG GPMTVAMLM NT Sbjct: 324 ITPVPGGVGPMTVAMLMHNT 343 Score = 30.3 bits (65), Expect = 0.58 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 297 ATVMGPXPPGTGV 259 ATVMGP PPGTGV Sbjct: 2 ATVMGPTPPGTGV 14 >AY047498-1|AAK77230.1| 309|Drosophila melanogaster GH01066p protein. Length = 309 Score = 71.3 bits (167), Expect = 3e-13 Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 3/79 (3%) Frame = +3 Query: 24 ATVTVCHSKT--KNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIEDPTKK 197 ATVT+CH T K L+ + A+I+VVA+G+P ++ +KPGA VID GIN I+D + Sbjct: 197 ATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKD--ES 254 Query: 198 SGQ-RLVGDVAYQEAVKVA 251 +GQ +LVGDV ++E +VA Sbjct: 255 TGQFKLVGDVDFEEVRQVA 273 Score = 41.5 bits (93), Expect = 2e-04 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = +2 Query: 257 VTPVPGGXGPMTVAMLMRNT 316 +TPVPGG GPMTVAMLM NT Sbjct: 276 ITPVPGGVGPMTVAMLMHNT 295 >AF186073-5|AAF07930.1| 303|Drosophila melanogaster NMDMC isoform B protein. Length = 303 Score = 71.3 bits (167), Expect = 3e-13 Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 3/79 (3%) Frame = +3 Query: 24 ATVTVCHSKT--KNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIEDPTKK 197 ATVT+CH T K L+ + A+I+VVA+G+P ++ +KPGA VID GIN I+D + Sbjct: 191 ATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKD--ES 248 Query: 198 SGQ-RLVGDVAYQEAVKVA 251 +GQ +LVGDV ++E +VA Sbjct: 249 TGQFKLVGDVDFEEVRQVA 267 Score = 41.5 bits (93), Expect = 2e-04 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = +2 Query: 257 VTPVPGGXGPMTVAMLMRNT 316 +TPVPGG GPMTVAMLM NT Sbjct: 270 ITPVPGGVGPMTVAMLMHNT 289 >AF186073-2|AAF07929.1| 309|Drosophila melanogaster NMDMC isoform A protein. Length = 309 Score = 71.3 bits (167), Expect = 3e-13 Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 3/79 (3%) Frame = +3 Query: 24 ATVTVCHSKT--KNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIEDPTKK 197 ATVT+CH T K L+ + A+I+VVA+G+P ++ +KPGA VID GIN I+D + Sbjct: 197 ATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKD--ES 254 Query: 198 SGQ-RLVGDVAYQEAVKVA 251 +GQ +LVGDV ++E +VA Sbjct: 255 TGQFKLVGDVDFEEVRQVA 273 Score = 41.5 bits (93), Expect = 2e-04 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = +2 Query: 257 VTPVPGGXGPMTVAMLMRNT 316 +TPVPGG GPMTVAMLM NT Sbjct: 276 ITPVPGGVGPMTVAMLMHNT 295 >AE014297-868|AAF54332.1| 303|Drosophila melanogaster CG18466-PA, isoform A protein. Length = 303 Score = 71.3 bits (167), Expect = 3e-13 Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 3/79 (3%) Frame = +3 Query: 24 ATVTVCHSKT--KNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIEDPTKK 197 ATVT+CH T K L+ + A+I+VVA+G+P ++ +KPGA VID GIN I+D + Sbjct: 191 ATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKD--ES 248 Query: 198 SGQ-RLVGDVAYQEAVKVA 251 +GQ +LVGDV ++E +VA Sbjct: 249 TGQFKLVGDVDFEEVRQVA 267 Score = 41.5 bits (93), Expect = 2e-04 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = +2 Query: 257 VTPVPGGXGPMTVAMLMRNT 316 +TPVPGG GPMTVAMLM NT Sbjct: 270 ITPVPGGVGPMTVAMLMHNT 289 >AE014297-867|AAN13408.1| 309|Drosophila melanogaster CG18466-PB, isoform B protein. Length = 309 Score = 71.3 bits (167), Expect = 3e-13 Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 3/79 (3%) Frame = +3 Query: 24 ATVTVCHSKT--KNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIEDPTKK 197 ATVT+CH T K L+ + A+I+VVA+G+P ++ +KPGA VID GIN I+D + Sbjct: 197 ATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKD--ES 254 Query: 198 SGQ-RLVGDVAYQEAVKVA 251 +GQ +LVGDV ++E +VA Sbjct: 255 TGQFKLVGDVDFEEVRQVA 273 Score = 41.5 bits (93), Expect = 2e-04 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = +2 Query: 257 VTPVPGGXGPMTVAMLMRNT 316 +TPVPGG GPMTVAMLM NT Sbjct: 276 ITPVPGGVGPMTVAMLMHNT 295 >Y07567-1|CAA68852.1| 774|Drosophila melanogaster TF125 type II protein. Length = 774 Score = 27.5 bits (58), Expect = 4.1 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = -3 Query: 217 PTKRCPLFFVGSSIALIPQSITTAPGLIQEPRTISGRPIATT 92 P +R P+ +++A + +SI T+ TI+GRP+ATT Sbjct: 283 PGQRLPVASSSAAMATMTRSIVTSTA---GTSTITGRPVATT 321 >X98235-1|CAA66887.1| 1182|Drosophila melanogaster TF125 protein. Length = 1182 Score = 27.5 bits (58), Expect = 4.1 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = -3 Query: 217 PTKRCPLFFVGSSIALIPQSITTAPGLIQEPRTISGRPIATT 92 P +R P+ +++A + +SI T+ TI+GRP+ATT Sbjct: 532 PGQRLPVASSSAAMATMTRSIVTSTA---GTSTITGRPVATT 570 >AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p protein. Length = 1371 Score = 27.5 bits (58), Expect = 4.1 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = -3 Query: 217 PTKRCPLFFVGSSIALIPQSITTAPGLIQEPRTISGRPIATT 92 P +R P+ +++A + +SI T+ TI+GRP+ATT Sbjct: 523 PGQRLPVASSSAAMATMTRSIVTSTA---GTSTITGRPVATT 561 >AE014297-3402|AAF56201.2| 1182|Drosophila melanogaster CG13598-PA, isoform A protein. Length = 1182 Score = 27.5 bits (58), Expect = 4.1 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = -3 Query: 217 PTKRCPLFFVGSSIALIPQSITTAPGLIQEPRTISGRPIATT 92 P +R P+ +++A + +SI T+ TI+GRP+ATT Sbjct: 532 PGQRLPVASSSAAMATMTRSIVTSTA---GTSTITGRPVATT 570 >AE014297-3401|AAO41596.1| 1362|Drosophila melanogaster CG13598-PB, isoform B protein. Length = 1362 Score = 27.5 bits (58), Expect = 4.1 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = -3 Query: 217 PTKRCPLFFVGSSIALIPQSITTAPGLIQEPRTISGRPIATT 92 P +R P+ +++A + +SI T+ TI+GRP+ATT Sbjct: 532 PGQRLPVASSSAAMATMTRSIVTSTA---GTSTITGRPVATT 570 >BT024229-1|ABC86291.1| 1428|Drosophila melanogaster LP01445p protein. Length = 1428 Score = 27.1 bits (57), Expect = 5.4 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -3 Query: 184 SSIALIPQSITTAPGLIQEPRTISGRPIATTSISAV 77 SSIA +P+ + T+ + RT+ G P+ T + V Sbjct: 197 SSIAELPEKLLTSGVYLPGTRTLQGDPLVTVDAACV 232 >AY113465-1|AAM29470.1| 151|Drosophila melanogaster RE39820p protein. Length = 151 Score = 26.2 bits (55), Expect = 9.4 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +2 Query: 215 GRRGIPGGGQSSFAVTPVPGGXG 283 GR G PGGG+ + PGG G Sbjct: 111 GRGGPPGGGRGTGGPPGAPGGSG 133 >AY095027-1|AAM11355.1| 1379|Drosophila melanogaster LD11664p protein. Length = 1379 Score = 26.2 bits (55), Expect = 9.4 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = +2 Query: 137 QAWSRRYRLWYQRY*GSYKEK----RATFSGRRGIPGGGQSSFAVTPVP 271 Q + Y W+ +Y YK + AT + +G+P ++ A PVP Sbjct: 108 QTYQEEYAKWHAQYGEQYKREMAAAAATTTAVQGVPAPVVATPAAAPVP 156 >AF038598-1|AAB92621.1| 151|Drosophila melanogaster small nuclear ribonucleoproteinSm D3 protein. Length = 151 Score = 26.2 bits (55), Expect = 9.4 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +2 Query: 215 GRRGIPGGGQSSFAVTPVPGGXG 283 GR G PGGG+ + PGG G Sbjct: 111 GRGGPPGGGRGTGGPPGAPGGSG 133 >AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-PC protein. Length = 1884 Score = 26.2 bits (55), Expect = 9.4 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = +2 Query: 137 QAWSRRYRLWYQRY*GSYKEK----RATFSGRRGIPGGGQSSFAVTPVP 271 Q + Y W+ +Y YK + AT + +G+P ++ A PVP Sbjct: 108 QTYQEEYAKWHAQYGEQYKREMAAAAATTTAVQGVPAPVVATPAAAPVP 156 >AE013599-1407|AAF58566.1| 151|Drosophila melanogaster CG8427-PA protein. Length = 151 Score = 26.2 bits (55), Expect = 9.4 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +2 Query: 215 GRRGIPGGGQSSFAVTPVPGGXG 283 GR G PGGG+ + PGG G Sbjct: 111 GRGGPPGGGRGTGGPPGAPGGSG 133 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,365,816 Number of Sequences: 53049 Number of extensions: 260037 Number of successful extensions: 861 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 838 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 861 length of database: 24,988,368 effective HSP length: 74 effective length of database: 21,062,742 effective search space used: 674007744 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -