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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20862
         (321 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021278-1|AAX33426.1|  934|Drosophila melanogaster RE42943p pro...   128   1e-30
AF082097-1|AAC78847.1|  934|Drosophila melanogaster C1-THF synth...   128   1e-30
AE014297-1172|AAN13479.1|  934|Drosophila melanogaster CG4067-PC...   128   1e-30
AE014297-1171|AAN13478.1|  934|Drosophila melanogaster CG4067-PA...   128   1e-30
AE014297-1168|AAX52944.1|  968|Drosophila melanogaster CG4067-PD...   128   1e-30
AE014297-1167|AAG22140.2|  968|Drosophila melanogaster CG4067-PB...   128   1e-30
L07958-1|AAB41352.1|  357|Drosophila melanogaster NAD-dependent ...    71   3e-13
AY047498-1|AAK77230.1|  309|Drosophila melanogaster GH01066p pro...    71   3e-13
AF186073-5|AAF07930.1|  303|Drosophila melanogaster NMDMC isofor...    71   3e-13
AF186073-2|AAF07929.1|  309|Drosophila melanogaster NMDMC isofor...    71   3e-13
AE014297-868|AAF54332.1|  303|Drosophila melanogaster CG18466-PA...    71   3e-13
AE014297-867|AAN13408.1|  309|Drosophila melanogaster CG18466-PB...    71   3e-13
Y07567-1|CAA68852.1|  774|Drosophila melanogaster TF125 type II ...    27   4.1  
X98235-1|CAA66887.1| 1182|Drosophila melanogaster TF125 protein.       27   4.1  
AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p pro...    27   4.1  
AE014297-3402|AAF56201.2| 1182|Drosophila melanogaster CG13598-P...    27   4.1  
AE014297-3401|AAO41596.1| 1362|Drosophila melanogaster CG13598-P...    27   4.1  
BT024229-1|ABC86291.1| 1428|Drosophila melanogaster LP01445p pro...    27   5.4  
AY113465-1|AAM29470.1|  151|Drosophila melanogaster RE39820p pro...    26   9.4  
AY095027-1|AAM11355.1| 1379|Drosophila melanogaster LD11664p pro...    26   9.4  
AF038598-1|AAB92621.1|  151|Drosophila melanogaster small nuclea...    26   9.4  
AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-P...    26   9.4  
AE013599-1407|AAF58566.1|  151|Drosophila melanogaster CG8427-PA...    26   9.4  

>BT021278-1|AAX33426.1|  934|Drosophila melanogaster RE42943p
           protein.
          Length = 934

 Score =  128 bits (310), Expect = 1e-30
 Identities = 60/83 (72%), Positives = 70/83 (84%)
 Frame = +3

Query: 3   ELLKWEHATVTVCHSKTKNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIE 182
           ELLKW +ATVTVCHSKT+NL EIT++A+ILVV IG  EMV+GSWIKPGAVVIDCGIN   
Sbjct: 182 ELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKP 241

Query: 183 DPTKKSGQRLVGDVAYQEAVKVA 251
           D +K SG +LVGDV Y EA++VA
Sbjct: 242 DASKASGSKLVGDVDYAEALQVA 264



 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +2

Query: 257 VTPVPGGXGPMTVAMLMRNT 316
           +TPVPGG GPMTVAMLM+NT
Sbjct: 267 LTPVPGGVGPMTVAMLMKNT 286


>AF082097-1|AAC78847.1|  934|Drosophila melanogaster C1-THF synthase
           homolog protein.
          Length = 934

 Score =  128 bits (310), Expect = 1e-30
 Identities = 60/83 (72%), Positives = 70/83 (84%)
 Frame = +3

Query: 3   ELLKWEHATVTVCHSKTKNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIE 182
           ELLKW +ATVTVCHSKT+NL EIT++A+ILVV IG  EMV+GSWIKPGAVVIDCGIN   
Sbjct: 182 ELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKP 241

Query: 183 DPTKKSGQRLVGDVAYQEAVKVA 251
           D +K SG +LVGDV Y EA++VA
Sbjct: 242 DASKASGSKLVGDVDYAEALQVA 264



 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +2

Query: 257 VTPVPGGXGPMTVAMLMRNT 316
           +TPVPGG GPMTVAMLM+NT
Sbjct: 267 LTPVPGGVGPMTVAMLMKNT 286


>AE014297-1172|AAN13479.1|  934|Drosophila melanogaster CG4067-PC,
           isoform C protein.
          Length = 934

 Score =  128 bits (310), Expect = 1e-30
 Identities = 60/83 (72%), Positives = 70/83 (84%)
 Frame = +3

Query: 3   ELLKWEHATVTVCHSKTKNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIE 182
           ELLKW +ATVTVCHSKT+NL EIT++A+ILVV IG  EMV+GSWIKPGAVVIDCGIN   
Sbjct: 182 ELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKP 241

Query: 183 DPTKKSGQRLVGDVAYQEAVKVA 251
           D +K SG +LVGDV Y EA++VA
Sbjct: 242 DASKASGSKLVGDVDYAEALQVA 264



 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +2

Query: 257 VTPVPGGXGPMTVAMLMRNT 316
           +TPVPGG GPMTVAMLM+NT
Sbjct: 267 LTPVPGGVGPMTVAMLMKNT 286


>AE014297-1171|AAN13478.1|  934|Drosophila melanogaster CG4067-PA,
           isoform A protein.
          Length = 934

 Score =  128 bits (310), Expect = 1e-30
 Identities = 60/83 (72%), Positives = 70/83 (84%)
 Frame = +3

Query: 3   ELLKWEHATVTVCHSKTKNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIE 182
           ELLKW +ATVTVCHSKT+NL EIT++A+ILVV IG  EMV+GSWIKPGAVVIDCGIN   
Sbjct: 182 ELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKP 241

Query: 183 DPTKKSGQRLVGDVAYQEAVKVA 251
           D +K SG +LVGDV Y EA++VA
Sbjct: 242 DASKASGSKLVGDVDYAEALQVA 264



 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +2

Query: 257 VTPVPGGXGPMTVAMLMRNT 316
           +TPVPGG GPMTVAMLM+NT
Sbjct: 267 LTPVPGGVGPMTVAMLMKNT 286


>AE014297-1168|AAX52944.1|  968|Drosophila melanogaster CG4067-PD,
           isoform D protein.
          Length = 968

 Score =  128 bits (310), Expect = 1e-30
 Identities = 60/83 (72%), Positives = 70/83 (84%)
 Frame = +3

Query: 3   ELLKWEHATVTVCHSKTKNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIE 182
           ELLKW +ATVTVCHSKT+NL EIT++A+ILVV IG  EMV+GSWIKPGAVVIDCGIN   
Sbjct: 216 ELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKP 275

Query: 183 DPTKKSGQRLVGDVAYQEAVKVA 251
           D +K SG +LVGDV Y EA++VA
Sbjct: 276 DASKASGSKLVGDVDYAEALQVA 298



 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +2

Query: 257 VTPVPGGXGPMTVAMLMRNT 316
           +TPVPGG GPMTVAMLM+NT
Sbjct: 301 LTPVPGGVGPMTVAMLMKNT 320


>AE014297-1167|AAG22140.2|  968|Drosophila melanogaster CG4067-PB,
           isoform B protein.
          Length = 968

 Score =  128 bits (310), Expect = 1e-30
 Identities = 60/83 (72%), Positives = 70/83 (84%)
 Frame = +3

Query: 3   ELLKWEHATVTVCHSKTKNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIE 182
           ELLKW +ATVTVCHSKT+NL EIT++A+ILVV IG  EMV+GSWIKPGAVVIDCGIN   
Sbjct: 216 ELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKP 275

Query: 183 DPTKKSGQRLVGDVAYQEAVKVA 251
           D +K SG +LVGDV Y EA++VA
Sbjct: 276 DASKASGSKLVGDVDYAEALQVA 298



 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +2

Query: 257 VTPVPGGXGPMTVAMLMRNT 316
           +TPVPGG GPMTVAMLM+NT
Sbjct: 301 LTPVPGGVGPMTVAMLMKNT 320


>L07958-1|AAB41352.1|  357|Drosophila melanogaster NAD-dependent
           methylenetetrahydrofolatedehydrogenase-
           methenyltetrahydrofolate cyclohydrolaseprotein.
          Length = 357

 Score = 71.3 bits (167), Expect = 3e-13
 Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
 Frame = +3

Query: 24  ATVTVCHSKT--KNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIEDPTKK 197
           ATVT+CH  T  K L+   + A+I+VVA+G+P ++    +KPGA VID GIN I+D  + 
Sbjct: 245 ATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKD--ES 302

Query: 198 SGQ-RLVGDVAYQEAVKVA 251
           +GQ +LVGDV ++E  +VA
Sbjct: 303 TGQFKLVGDVDFEEVRQVA 321



 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +2

Query: 257 VTPVPGGXGPMTVAMLMRNT 316
           +TPVPGG GPMTVAMLM NT
Sbjct: 324 ITPVPGGVGPMTVAMLMHNT 343



 Score = 30.3 bits (65), Expect = 0.58
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -1

Query: 297 ATVMGPXPPGTGV 259
           ATVMGP PPGTGV
Sbjct: 2   ATVMGPTPPGTGV 14


>AY047498-1|AAK77230.1|  309|Drosophila melanogaster GH01066p
           protein.
          Length = 309

 Score = 71.3 bits (167), Expect = 3e-13
 Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
 Frame = +3

Query: 24  ATVTVCHSKT--KNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIEDPTKK 197
           ATVT+CH  T  K L+   + A+I+VVA+G+P ++    +KPGA VID GIN I+D  + 
Sbjct: 197 ATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKD--ES 254

Query: 198 SGQ-RLVGDVAYQEAVKVA 251
           +GQ +LVGDV ++E  +VA
Sbjct: 255 TGQFKLVGDVDFEEVRQVA 273



 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +2

Query: 257 VTPVPGGXGPMTVAMLMRNT 316
           +TPVPGG GPMTVAMLM NT
Sbjct: 276 ITPVPGGVGPMTVAMLMHNT 295


>AF186073-5|AAF07930.1|  303|Drosophila melanogaster NMDMC isoform B
           protein.
          Length = 303

 Score = 71.3 bits (167), Expect = 3e-13
 Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
 Frame = +3

Query: 24  ATVTVCHSKT--KNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIEDPTKK 197
           ATVT+CH  T  K L+   + A+I+VVA+G+P ++    +KPGA VID GIN I+D  + 
Sbjct: 191 ATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKD--ES 248

Query: 198 SGQ-RLVGDVAYQEAVKVA 251
           +GQ +LVGDV ++E  +VA
Sbjct: 249 TGQFKLVGDVDFEEVRQVA 267



 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +2

Query: 257 VTPVPGGXGPMTVAMLMRNT 316
           +TPVPGG GPMTVAMLM NT
Sbjct: 270 ITPVPGGVGPMTVAMLMHNT 289


>AF186073-2|AAF07929.1|  309|Drosophila melanogaster NMDMC isoform A
           protein.
          Length = 309

 Score = 71.3 bits (167), Expect = 3e-13
 Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
 Frame = +3

Query: 24  ATVTVCHSKT--KNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIEDPTKK 197
           ATVT+CH  T  K L+   + A+I+VVA+G+P ++    +KPGA VID GIN I+D  + 
Sbjct: 197 ATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKD--ES 254

Query: 198 SGQ-RLVGDVAYQEAVKVA 251
           +GQ +LVGDV ++E  +VA
Sbjct: 255 TGQFKLVGDVDFEEVRQVA 273



 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +2

Query: 257 VTPVPGGXGPMTVAMLMRNT 316
           +TPVPGG GPMTVAMLM NT
Sbjct: 276 ITPVPGGVGPMTVAMLMHNT 295


>AE014297-868|AAF54332.1|  303|Drosophila melanogaster CG18466-PA,
           isoform A protein.
          Length = 303

 Score = 71.3 bits (167), Expect = 3e-13
 Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
 Frame = +3

Query: 24  ATVTVCHSKT--KNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIEDPTKK 197
           ATVT+CH  T  K L+   + A+I+VVA+G+P ++    +KPGA VID GIN I+D  + 
Sbjct: 191 ATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKD--ES 248

Query: 198 SGQ-RLVGDVAYQEAVKVA 251
           +GQ +LVGDV ++E  +VA
Sbjct: 249 TGQFKLVGDVDFEEVRQVA 267



 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +2

Query: 257 VTPVPGGXGPMTVAMLMRNT 316
           +TPVPGG GPMTVAMLM NT
Sbjct: 270 ITPVPGGVGPMTVAMLMHNT 289


>AE014297-867|AAN13408.1|  309|Drosophila melanogaster CG18466-PB,
           isoform B protein.
          Length = 309

 Score = 71.3 bits (167), Expect = 3e-13
 Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
 Frame = +3

Query: 24  ATVTVCHSKT--KNLSEITKTAEILVVAIGRPEMVRGSWIKPGAVVIDCGINAIEDPTKK 197
           ATVT+CH  T  K L+   + A+I+VVA+G+P ++    +KPGA VID GIN I+D  + 
Sbjct: 197 ATVTICHRYTPPKELARHCRQADIIVVAVGKPGLITKDMVKPGACVIDVGINRIKD--ES 254

Query: 198 SGQ-RLVGDVAYQEAVKVA 251
           +GQ +LVGDV ++E  +VA
Sbjct: 255 TGQFKLVGDVDFEEVRQVA 273



 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +2

Query: 257 VTPVPGGXGPMTVAMLMRNT 316
           +TPVPGG GPMTVAMLM NT
Sbjct: 276 ITPVPGGVGPMTVAMLMHNT 295


>Y07567-1|CAA68852.1|  774|Drosophila melanogaster TF125 type II
           protein.
          Length = 774

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -3

Query: 217 PTKRCPLFFVGSSIALIPQSITTAPGLIQEPRTISGRPIATT 92
           P +R P+    +++A + +SI T+        TI+GRP+ATT
Sbjct: 283 PGQRLPVASSSAAMATMTRSIVTSTA---GTSTITGRPVATT 321


>X98235-1|CAA66887.1| 1182|Drosophila melanogaster TF125 protein.
          Length = 1182

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -3

Query: 217 PTKRCPLFFVGSSIALIPQSITTAPGLIQEPRTISGRPIATT 92
           P +R P+    +++A + +SI T+        TI+GRP+ATT
Sbjct: 532 PGQRLPVASSSAAMATMTRSIVTSTA---GTSTITGRPVATT 570


>AY058767-1|AAL13996.1| 1371|Drosophila melanogaster SD04244p
           protein.
          Length = 1371

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -3

Query: 217 PTKRCPLFFVGSSIALIPQSITTAPGLIQEPRTISGRPIATT 92
           P +R P+    +++A + +SI T+        TI+GRP+ATT
Sbjct: 523 PGQRLPVASSSAAMATMTRSIVTSTA---GTSTITGRPVATT 561


>AE014297-3402|AAF56201.2| 1182|Drosophila melanogaster CG13598-PA,
           isoform A protein.
          Length = 1182

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -3

Query: 217 PTKRCPLFFVGSSIALIPQSITTAPGLIQEPRTISGRPIATT 92
           P +R P+    +++A + +SI T+        TI+GRP+ATT
Sbjct: 532 PGQRLPVASSSAAMATMTRSIVTSTA---GTSTITGRPVATT 570


>AE014297-3401|AAO41596.1| 1362|Drosophila melanogaster CG13598-PB,
           isoform B protein.
          Length = 1362

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -3

Query: 217 PTKRCPLFFVGSSIALIPQSITTAPGLIQEPRTISGRPIATT 92
           P +R P+    +++A + +SI T+        TI+GRP+ATT
Sbjct: 532 PGQRLPVASSSAAMATMTRSIVTSTA---GTSTITGRPVATT 570


>BT024229-1|ABC86291.1| 1428|Drosophila melanogaster LP01445p
           protein.
          Length = 1428

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 184 SSIALIPQSITTAPGLIQEPRTISGRPIATTSISAV 77
           SSIA +P+ + T+   +   RT+ G P+ T   + V
Sbjct: 197 SSIAELPEKLLTSGVYLPGTRTLQGDPLVTVDAACV 232


>AY113465-1|AAM29470.1|  151|Drosophila melanogaster RE39820p
           protein.
          Length = 151

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 215 GRRGIPGGGQSSFAVTPVPGGXG 283
           GR G PGGG+ +      PGG G
Sbjct: 111 GRGGPPGGGRGTGGPPGAPGGSG 133


>AY095027-1|AAM11355.1| 1379|Drosophila melanogaster LD11664p
           protein.
          Length = 1379

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = +2

Query: 137 QAWSRRYRLWYQRY*GSYKEK----RATFSGRRGIPGGGQSSFAVTPVP 271
           Q +   Y  W+ +Y   YK +     AT +  +G+P    ++ A  PVP
Sbjct: 108 QTYQEEYAKWHAQYGEQYKREMAAAAATTTAVQGVPAPVVATPAAAPVP 156


>AF038598-1|AAB92621.1|  151|Drosophila melanogaster small nuclear
           ribonucleoproteinSm D3 protein.
          Length = 151

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 215 GRRGIPGGGQSSFAVTPVPGGXG 283
           GR G PGGG+ +      PGG G
Sbjct: 111 GRGGPPGGGRGTGGPPGAPGGSG 133


>AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-PC
           protein.
          Length = 1884

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = +2

Query: 137 QAWSRRYRLWYQRY*GSYKEK----RATFSGRRGIPGGGQSSFAVTPVP 271
           Q +   Y  W+ +Y   YK +     AT +  +G+P    ++ A  PVP
Sbjct: 108 QTYQEEYAKWHAQYGEQYKREMAAAAATTTAVQGVPAPVVATPAAAPVP 156


>AE013599-1407|AAF58566.1|  151|Drosophila melanogaster CG8427-PA
           protein.
          Length = 151

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 215 GRRGIPGGGQSSFAVTPVPGGXG 283
           GR G PGGG+ +      PGG G
Sbjct: 111 GRGGPPGGGRGTGGPPGAPGGSG 133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,365,816
Number of Sequences: 53049
Number of extensions: 260037
Number of successful extensions: 861
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 674007744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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