Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20860
         (343 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal ...    25   0.78 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   1.0  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    21   9.6  

>AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal
           carrier protein TOL-1 protein.
          Length = 272

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +1

Query: 85  HNASQLVVDYQTNTLFFSHSSLFEGKTVLKSA---YLNLNTKEFGE 213
           +N +   VDY  + L     +LFEG  VL+ +   YLN N +   E
Sbjct: 187 YNVTGTKVDYTISGLRLHMGNLFEGVKVLEDSTNQYLNDNWRPVSE 232


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 284  LSTKVXNVFSLSYAVATPXLMPDISPNSL 198
            LS +V  + S   A ATP +MP +   S+
Sbjct: 1057 LSQRVSTITSTMAAAATPLMMPSVITTSV 1085


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 124 CWFGSRLRV 98
           CW GSR RV
Sbjct: 382 CWIGSRTRV 390


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 308,314
Number of Sequences: 2352
Number of extensions: 4572
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)