Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20860
         (343 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-963|AAF52283.1|  429|Drosophila melanogaster CG14006-PA...    35   0.024
BT021359-1|AAX33507.1| 2059|Drosophila melanogaster LP14642p pro...    30   0.68 
U13637-1|AAB60217.1| 1984|Drosophila melanogaster vitellogenin r...    28   3.7  
BT003478-1|AAO39481.1| 1937|Drosophila melanogaster RE59172p pro...    28   3.7  
AE014298-2008|AAF48349.2| 1937|Drosophila melanogaster CG1372-PA...    28   3.7  
AE014298-2007|AAS65339.1| 1984|Drosophila melanogaster CG1372-PB...    28   3.7  
AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellula...    27   4.8  
AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-P...    27   4.8  
L76559-1|AAB67306.1| 2059|Drosophila melanogaster Mus308 protein.      27   6.4  
BT022585-1|AAY55001.1|  149|Drosophila melanogaster IP06751p pro...    27   6.4  
BT022546-1|AAY54962.1|  149|Drosophila melanogaster IP06551p pro...    27   6.4  
BT022521-1|AAY54937.1|  149|Drosophila melanogaster IP06451p pro...    27   6.4  
AE014297-1578|AAF54858.1| 2059|Drosophila melanogaster CG6019-PA...    27   6.4  
AE014296-2413|AAF49716.5|  112|Drosophila melanogaster CG13476-P...    27   6.4  
AE014296-2412|AAS65006.1|  149|Drosophila melanogaster CG13476-P...    27   6.4  
AY051862-1|AAK93286.1|  449|Drosophila melanogaster LD35854p pro...    27   8.4  
AE014297-2293|AAF55378.1|  623|Drosophila melanogaster CG4009-PA...    27   8.4  
AE013599-3739|AAF47105.1|  700|Drosophila melanogaster CG3735-PA...    27   8.4  

>AE014134-963|AAF52283.1|  429|Drosophila melanogaster CG14006-PA
           protein.
          Length = 429

 Score = 35.1 bits (77), Expect = 0.024
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +3

Query: 9   ESDNXDNYNCFSSREPRIGSXKR*CAQCIPTRSRLPNQH--TVFQSLFFVRRENSS 170
           E ++ DN   + SR P   +    C QC PTRS  P  H  +++++L +   ++SS
Sbjct: 370 EQEDQDNALIYESRRPTERNCFNRCHQCTPTRSPRPEPHLTSLYRNLHYSNAKSSS 425


>BT021359-1|AAX33507.1| 2059|Drosophila melanogaster LP14642p protein.
          Length = 2059

 Score = 30.3 bits (65), Expect = 0.68
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 55   QELEVLKDNVHNASQLVVDYQTNTLFFSHSSLFEGKTVLKSAYL-NLNT 198
            QE  ++ D  H A + + DY T  + F+HS  F      +  YL N+N+
Sbjct: 1902 QEARMISDQFHQAYKGIRDYTTRVVNFAHSKGFVETITGRRRYLENINS 1950


>U13637-1|AAB60217.1| 1984|Drosophila melanogaster vitellogenin
           receptor protein.
          Length = 1984

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 34  IALVHGNQELEVLKDNVHNAS-QLVVDYQTNTLFFSHSSL 150
           I L    +++ V +D++ +   +LV DY+T T+F+S S L
Sbjct: 854 IPLSGKGEQVHVFEDDLGDDDIKLVTDYETQTIFWSDSDL 893


>BT003478-1|AAO39481.1| 1937|Drosophila melanogaster RE59172p
           protein.
          Length = 1937

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 34  IALVHGNQELEVLKDNVHNAS-QLVVDYQTNTLFFSHSSL 150
           I L    +++ V +D++ +   +LV DY+T T+F+S S L
Sbjct: 854 IPLSGKGEQVHVFEDDLGDDDIKLVTDYETQTIFWSDSDL 893


>AE014298-2008|AAF48349.2| 1937|Drosophila melanogaster CG1372-PA,
           isoform A protein.
          Length = 1937

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 34  IALVHGNQELEVLKDNVHNAS-QLVVDYQTNTLFFSHSSL 150
           I L    +++ V +D++ +   +LV DY+T T+F+S S L
Sbjct: 854 IPLSGKGEQVHVFEDDLGDDDIKLVTDYETQTIFWSDSDL 893


>AE014298-2007|AAS65339.1| 1984|Drosophila melanogaster CG1372-PB,
           isoform B protein.
          Length = 1984

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +1

Query: 34  IALVHGNQELEVLKDNVHNAS-QLVVDYQTNTLFFSHSSL 150
           I L    +++ V +D++ +   +LV DY+T T+F+S S L
Sbjct: 854 IPLSGKGEQVHVFEDDLGDDDIKLVTDYETQTIFWSDSDL 893


>AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellular
            matrix protein papilin3 protein.
          Length = 2898

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 36   CFSSREPRIGSXKR*CAQCIPT-RSRLPNQH 125
            C + REPR+GS K  C   + T R   P+ H
Sbjct: 2303 CLAGREPRVGSAKEICLLPVATGRCNGPSVH 2333


>AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-PA,
            isoform A protein.
          Length = 2894

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 36   CFSSREPRIGSXKR*CAQCIPT-RSRLPNQH 125
            C + REPR+GS K  C   + T R   P+ H
Sbjct: 2303 CLAGREPRVGSAKEICLLPVATGRCNGPSVH 2333


>L76559-1|AAB67306.1| 2059|Drosophila melanogaster Mus308 protein.
          Length = 2059

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +1

Query: 55   QELEVLKDNVHNASQLVVDYQTNTLFFSHSSLFEGKTVLKSAYL-NLNT 198
            QE  ++ D  H A + + DY T  + F+ S  F      +  YL N+N+
Sbjct: 1902 QEARMISDQFHQAYKGIRDYTTRVVNFARSKGFVETITGRRRYLENINS 1950


>BT022585-1|AAY55001.1|  149|Drosophila melanogaster IP06751p
           protein.
          Length = 149

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 52  NQELEVLKDNVHNASQLVVDYQ 117
           NQEL  +KD +HNA   V+ Y+
Sbjct: 52  NQELLKMKDTIHNAISNVMGYE 73


>BT022546-1|AAY54962.1|  149|Drosophila melanogaster IP06551p
           protein.
          Length = 149

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 52  NQELEVLKDNVHNASQLVVDYQ 117
           NQEL  +KD +HNA   V+ Y+
Sbjct: 52  NQELLKMKDTIHNAISNVMGYE 73


>BT022521-1|AAY54937.1|  149|Drosophila melanogaster IP06451p
           protein.
          Length = 149

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 52  NQELEVLKDNVHNASQLVVDYQ 117
           NQEL  +KD +HNA   V+ Y+
Sbjct: 52  NQELLKMKDTIHNAISNVMGYE 73


>AE014297-1578|AAF54858.1| 2059|Drosophila melanogaster CG6019-PA
            protein.
          Length = 2059

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +1

Query: 55   QELEVLKDNVHNASQLVVDYQTNTLFFSHSSLFEGKTVLKSAYL-NLNT 198
            QE  ++ D  H A + + DY T  + F+ S  F      +  YL N+N+
Sbjct: 1902 QEARMISDQFHQAYKGIRDYTTRVVNFARSKGFVETITGRRRYLENINS 1950


>AE014296-2413|AAF49716.5|  112|Drosophila melanogaster CG13476-PA,
           isoform A protein.
          Length = 112

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 52  NQELEVLKDNVHNASQLVVDYQ 117
           NQEL  +KD +HNA   V+ Y+
Sbjct: 52  NQELLKMKDTIHNAISNVMGYE 73


>AE014296-2412|AAS65006.1|  149|Drosophila melanogaster CG13476-PB,
           isoform B protein.
          Length = 149

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 52  NQELEVLKDNVHNASQLVVDYQ 117
           NQEL  +KD +HNA   V+ Y+
Sbjct: 52  NQELLKMKDTIHNAISNVMGYE 73


>AY051862-1|AAK93286.1|  449|Drosophila melanogaster LD35854p
           protein.
          Length = 449

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +1

Query: 40  LVHGNQELEVLKDNVHNASQLVVDYQTNTLFF 135
           L+ G+Q+ +  K ++ N  + + DY  NT++F
Sbjct: 65  LLFGSQDDQARKTSIANYERFLGDYSGNTIYF 96


>AE014297-2293|AAF55378.1|  623|Drosophila melanogaster CG4009-PA
           protein.
          Length = 623

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +2

Query: 119 PTHCFSVTLLCSKGKQFLN 175
           P   F  TLLC  GKQFLN
Sbjct: 550 PDALFGPTLLCVIGKQFLN 568


>AE013599-3739|AAF47105.1|  700|Drosophila melanogaster CG3735-PA
           protein.
          Length = 700

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +1

Query: 40  LVHGNQELEVLKDNVHNASQLVVDYQTNTLFF 135
           L+ G+Q+ +  K ++ N  + + DY  NT++F
Sbjct: 316 LLFGSQDDQARKTSIANYERFLGDYSGNTIYF 347


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,721,466
Number of Sequences: 53049
Number of extensions: 208246
Number of successful extensions: 497
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)