Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20857
         (512 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    36   2e-04
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    25   0.52 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    25   0.52 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   0.91 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   1.2  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   1.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   4.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   8.5  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 35.9 bits (79), Expect = 2e-04
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 2   CTETVDGYRCACPMSHTGKNCE 67
           C + +  Y C CP  HTGKNCE
Sbjct: 432 CQDKLGDYACYCPPKHTGKNCE 453



 Score = 31.5 bits (68), Expect = 0.005
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 14 VDGYRCACPMSHTGKNCET 70
          VD Y C CP+  +G NC+T
Sbjct: 4  VDSYTCTCPLGFSGINCQT 22



 Score = 31.5 bits (68), Expect = 0.005
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 2   CTETVDGYRCACPMSHTGKNCE 67
           CT    G++C CP    GKNCE
Sbjct: 353 CTTIHAGHKCTCPEGFYGKNCE 374



 Score = 30.3 bits (65), Expect = 0.011
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 2   CTETVDGYRCACPMSHTGKNCE 67
           C + +  Y C CP    G+NCE
Sbjct: 199 CLDLIGSYSCKCPKGFQGQNCE 220



 Score = 30.3 bits (65), Expect = 0.011
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 2   CTETVDGYRCACPMSHTGKNCETK 73
           C + V+ Y C C +   G++CE+K
Sbjct: 315 CVQLVNDYHCNCKLGFMGRHCESK 338



 Score = 28.7 bits (61), Expect = 0.032
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 2   CTETVDGYRCACPMSHTGKNC 64
           C +    Y C CP  +TGK+C
Sbjct: 76  CQDHTTHYTCHCPYGYTGKDC 96



 Score = 28.7 bits (61), Expect = 0.032
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 2   CTETVDGYRCACPMSHTGKNCE 67
           C + V G+ C CP    G  CE
Sbjct: 275 CLDKVGGFECKCPPGFVGPRCE 296



 Score = 28.3 bits (60), Expect = 0.042
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 2   CTETVDGYRCACPMSHTGKNCETK 73
           C + ++ Y C C    TG NC+ +
Sbjct: 38  CIDGINSYICTCKPGFTGSNCQNR 61



 Score = 26.6 bits (56), Expect = 0.13
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +2

Query: 2   CTETVDGYRCACPMSHTGKNCETKQL 79
           C +  + Y+C C +  TGK C+ + +
Sbjct: 114 CVQNKNQYQCLCGVGWTGKVCDVEMV 139



 Score = 26.2 bits (55), Expect = 0.17
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 20  GYRCACPMSHTGKNCE 67
           GY C CP    G NCE
Sbjct: 398 GYICDCPSGTNGTNCE 413



 Score = 25.0 bits (52), Expect = 0.40
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 2   CTETVDGYRCACPMSHTGKNCE 67
           C + V+ + C+CP    G  CE
Sbjct: 237 CHDLVNSFSCSCPSGTLGYICE 258



 Score = 24.2 bits (50), Expect = 0.69
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +2

Query: 2   CTETVDGYRCACPMSHTGKNCETK 73
           C +  + +RC C   ++G  C+T+
Sbjct: 161 CEDIGNSHRCHCSDGYSGSYCQTE 184


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 24.6 bits (51), Expect = 0.52
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 170 AATPVTDGIIMYCAESSRGYGGFTSLTV 253
           AA  +T+  +M+C E + G   F +LTV
Sbjct: 231 AAEVLTNPKLMFCDEPTSGLDSFMALTV 258


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 24.6 bits (51), Expect = 0.52
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 170 AATPVTDGIIMYCAESSRGYGGFTSLTV 253
           AA  +T+  +M+C E + G   F +LTV
Sbjct: 231 AAEVLTNPKLMFCDEPTSGLDSFMALTV 258


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 20 GYRCACPMSHTGKNC 64
          G+RC C    TGK C
Sbjct: 51 GHRCQCQPGFTGKYC 65



 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/24 (29%), Positives = 10/24 (41%)
 Frame = +2

Query: 2   CTETVDGYRCACPMSHTGKNCETK 73
           C + +  + C C     GK C  K
Sbjct: 121 CVDRIADFECNCKNGWKGKTCSLK 144


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 345 DRHSDRPPRGFRLHED 392
           D H DRPPR F    D
Sbjct: 252 DDHRDRPPRHFHEEHD 267


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 13/42 (30%), Positives = 15/42 (35%)
 Frame = -3

Query: 327 WPVTCKHHGSASGSEVVTELKSSIGTVSEVKPPYPRDDSAQY 202
           WP   K  G +S      E      TV+   P Y   D  QY
Sbjct: 153 WPDEAKKKGCSSEEVFQFECPKVNETVAATHPRYADPDDCQY 194


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 90  GYAISCFVSQFLP 52
           GYAISC   +F+P
Sbjct: 204 GYAISCARYRFMP 216


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 218 SRGYGGFTSLTVPMED 265
           S+GYGG  +  + M+D
Sbjct: 360 SKGYGGAMTWAIDMDD 375


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = -3

Query: 339 VRGQWPVTCKHHGSASGSEVVTELKSSIGTV 247
           +RG W     HH     S V T     + TV
Sbjct: 209 LRGSWDGVTGHHSGLYPSAVDTTTNQKLLTV 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,309
Number of Sequences: 336
Number of extensions: 2306
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)