Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20856
         (357 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.54 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   2.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   2.2  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   2.2  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   2.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   6.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   6.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   6.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   8.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 0.54
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 176 CQCRQNSRCANMENTELXTNTRCSXG 253
           C+   NSRC + E+++     RC  G
Sbjct: 76  CRDLPNSRCNSRESSDSLVQPRCPSG 101


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 245 SNGYWFXVLYSPYLHT 198
           SNGY +   Y P LH+
Sbjct: 76  SNGYGYGNYYHPQLHS 91


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 245 SNGYWFXVLYSPYLHT 198
           SNGY +   Y P LH+
Sbjct: 76  SNGYGYGNYYHPQLHS 91


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 302  SDSRNNLSWDIHYWI 346
            +D+  N ++ IHYWI
Sbjct: 2038 ADATFNTNFTIHYWI 2052


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 245 SNGYWFXVLYSPYLHT 198
           SNGY +   Y P LH+
Sbjct: 76  SNGYGYGNYYHPQLHS 91


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 245 SNGYWFXVLYSPYLHT 198
           SNGY +   Y P LH+
Sbjct: 76  SNGYGYGNYYHPQLHS 91


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = +1

Query: 217 YRTXNQYPLLXRTXKILQRXF--IHHFTDDLGQSQQSIMGYPL 339
           Y    +   + R  K + R +  +H+ + +LG+   +  GY L
Sbjct: 39  YNDLQELKYMERVIKEVLRLYPSVHYISRELGEDMVTTTGYKL 81


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 353 PDRSSSGYP 327
           PDR S GYP
Sbjct: 635 PDRRSMGYP 643


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 353 PDRSSSGYP 327
           PDR S GYP
Sbjct: 634 PDRRSMGYP 642


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 280  IHHFTDDLGQSQQSIMGYPLL 342
            +HH    L +S   I G PLL
Sbjct: 1307 LHHHLSKLIKSFNEIYGVPLL 1327


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 9/44 (20%), Positives = 18/44 (40%)
 Frame = -2

Query: 311 DCPRSSVK*CMNXLCRIFXVLXSNGYWFXVLYSPYLHTGCSADI 180
           +C   ++  C +  C+    +  +       Y P  HTG + +I
Sbjct: 411 NCEIDTINECDSNPCKHLDAICQDKLGDYACYCPPKHTGKNCEI 454


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,594
Number of Sequences: 336
Number of extensions: 1565
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)