Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20852
         (378 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.44 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   1.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   1.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   2.3  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   3.1  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   4.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   5.4  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 0.44
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 142 CNSCFSGTGSPNKTGNFIH 198
           C+ C+S  G+ +K G  IH
Sbjct: 298 CDVCYSTIGTVSKAGELIH 316



 Score = 21.0 bits (42), Expect = 4.1
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 142 CNSCFSGTGSPNKTGNFIH 198
           C+ C+S     +K+G  IH
Sbjct: 926 CHVCYSTIQEVSKSGELIH 944


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 142 CNSCFSGTGSPNKTGNFIH 198
           C+ C+S     NK G  IH
Sbjct: 577 CDVCYSTIEEANKAGELIH 595


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 142 CNSCFSGTGSPNKTGNFIH 198
           C+ C+S     NK G  IH
Sbjct: 302 CDVCYSTIEEANKAGELIH 320


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 167 PVPLKQLLQNSLFAPEPICRRSATFLIYLYV 75
           P+PL  +   ++  P  IC  SA  LI++ V
Sbjct: 182 PLPLPPIFPPTMINPSAICE-SAAQLIFMNV 211


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +1

Query: 145 NSCFSGTG-SPNKTGNFIHWSLH 210
           N CF     +P+K G    WSLH
Sbjct: 195 NDCFVKVPRTPDKPGKGSFWSLH 217


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -2

Query: 167 PVPLKQLLQNSLFAPEPICRRSATFL 90
           P+PL  +   ++  P  IC  +A  L
Sbjct: 182 PLPLPPIFAPTMINPSAICESAAQLL 207


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 330 LHSFVHICFVGMLDLSYNLAI 268
           LH F   C++ +L L  N+A+
Sbjct: 169 LHEFYGFCYLWVLILICNIAL 189


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 134 LFAPEPICRR 105
           +F PEP+C R
Sbjct: 234 VFRPEPLCER 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,940
Number of Sequences: 336
Number of extensions: 1629
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)