Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20843
         (606 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071689-1|AAL49311.1|  185|Drosophila melanogaster RH10518p pro...   118   8e-27
AF149800-1|AAD37797.2|  185|Drosophila melanogaster Miple protein.    118   8e-27
AE014296-69|AAS64923.1|  185|Drosophila melanogaster CG1221-PB, ...   118   8e-27
AE014296-68|AAF47368.2|  185|Drosophila melanogaster CG1221-PA, ...   118   8e-27
AF215688-1|AAF22851.1|  279|Drosophila melanogaster Miple2 protein.   101   8e-22
AE014296-71|AAF47369.1|  279|Drosophila melanogaster CG18321-PA ...   101   8e-22
AY071054-1|AAL48676.1|  279|Drosophila melanogaster RE13914p pro...    99   2e-21
AY070538-1|AAL48009.1|  223|Drosophila melanogaster LD21194p pro...    32   0.53 
AE013599-208|AAM70816.1|  223|Drosophila melanogaster CG3403-PA ...    32   0.53 
U18774-1|AAA89117.1| 1038|Drosophila melanogaster Sog protein.         28   8.6  
BT023895-1|ABA81829.1| 1038|Drosophila melanogaster LP20363p pro...    28   8.6  
AE014298-2182|AAF48481.1| 1038|Drosophila melanogaster CG9224-PA...    28   8.6  

>AY071689-1|AAL49311.1|  185|Drosophila melanogaster RH10518p
           protein.
          Length = 185

 Score =  118 bits (283), Expect = 8e-27
 Identities = 50/78 (64%), Positives = 64/78 (82%)
 Frame = +3

Query: 15  ACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSECSIN 194
           +CRY +  W+ECD+KTN RSR LTLKKGDPA C+  +TIQKKCK+ CRYEK SWSEC+  
Sbjct: 75  SCRYGKNPWTECDTKTNTRSRTLTLKKGDPA-CDQTRTIQKKCKKACRYEKGSWSECA-T 132

Query: 195 GEMSRTDKLKSNSDSTCD 248
           G+M+R DKLK++SD +C+
Sbjct: 133 GQMTRADKLKASSDPSCE 150



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 22/57 (38%), Positives = 33/57 (57%)
 Frame = +3

Query: 3   KNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSS 173
           K ++ACRY +G+WSEC +    R+ K  LK     +CE  + I+K CK     +KS+
Sbjct: 115 KCKKACRYEKGSWSECATGQMTRADK--LKASSDPSCEATRVIKKNCKPGKSKDKSA 169



 Score = 32.3 bits (70), Expect = 0.53
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 150 TCRYEKSSWSECSI-NGEMSRTDKLKSNSDSTCDQS 254
           +CRY K+ W+EC       SRT  LK   D  CDQ+
Sbjct: 75  SCRYGKNPWTECDTKTNTRSRTLTLK-KGDPACDQT 109


>AF149800-1|AAD37797.2|  185|Drosophila melanogaster Miple protein.
          Length = 185

 Score =  118 bits (283), Expect = 8e-27
 Identities = 50/78 (64%), Positives = 64/78 (82%)
 Frame = +3

Query: 15  ACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSECSIN 194
           +CRY +  W+ECD+KTN RSR LTLKKGDPA C+  +TIQKKCK+ CRYEK SWSEC+  
Sbjct: 75  SCRYGKNPWTECDTKTNTRSRTLTLKKGDPA-CDQTRTIQKKCKKACRYEKGSWSECA-T 132

Query: 195 GEMSRTDKLKSNSDSTCD 248
           G+M+R DKLK++SD +C+
Sbjct: 133 GQMTRADKLKASSDPSCE 150



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 22/57 (38%), Positives = 33/57 (57%)
 Frame = +3

Query: 3   KNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSS 173
           K ++ACRY +G+WSEC +    R+ K  LK     +CE  + I+K CK     +KS+
Sbjct: 115 KCKKACRYEKGSWSECATGQMTRADK--LKASSDPSCEATRVIKKNCKPGKSKDKSA 169



 Score = 32.3 bits (70), Expect = 0.53
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 150 TCRYEKSSWSECSI-NGEMSRTDKLKSNSDSTCDQS 254
           +CRY K+ W+EC       SRT  LK   D  CDQ+
Sbjct: 75  SCRYGKNPWTECDTKTNTRSRTLTLK-KGDPACDQT 109


>AE014296-69|AAS64923.1|  185|Drosophila melanogaster CG1221-PB,
           isoform B protein.
          Length = 185

 Score =  118 bits (283), Expect = 8e-27
 Identities = 50/78 (64%), Positives = 64/78 (82%)
 Frame = +3

Query: 15  ACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSECSIN 194
           +CRY +  W+ECD+KTN RSR LTLKKGDPA C+  +TIQKKCK+ CRYEK SWSEC+  
Sbjct: 75  SCRYGKNPWTECDTKTNTRSRTLTLKKGDPA-CDQTRTIQKKCKKACRYEKGSWSECA-T 132

Query: 195 GEMSRTDKLKSNSDSTCD 248
           G+M+R DKLK++SD +C+
Sbjct: 133 GQMTRADKLKASSDPSCE 150



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 22/57 (38%), Positives = 33/57 (57%)
 Frame = +3

Query: 3   KNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSS 173
           K ++ACRY +G+WSEC +    R+ K  LK     +CE  + I+K CK     +KS+
Sbjct: 115 KCKKACRYEKGSWSECATGQMTRADK--LKASSDPSCEATRVIKKNCKPGKSKDKSA 169



 Score = 32.3 bits (70), Expect = 0.53
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 150 TCRYEKSSWSECSI-NGEMSRTDKLKSNSDSTCDQS 254
           +CRY K+ W+EC       SRT  LK   D  CDQ+
Sbjct: 75  SCRYGKNPWTECDTKTNTRSRTLTLK-KGDPACDQT 109


>AE014296-68|AAF47368.2|  185|Drosophila melanogaster CG1221-PA,
           isoform A protein.
          Length = 185

 Score =  118 bits (283), Expect = 8e-27
 Identities = 50/78 (64%), Positives = 64/78 (82%)
 Frame = +3

Query: 15  ACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSECSIN 194
           +CRY +  W+ECD+KTN RSR LTLKKGDPA C+  +TIQKKCK+ CRYEK SWSEC+  
Sbjct: 75  SCRYGKNPWTECDTKTNTRSRTLTLKKGDPA-CDQTRTIQKKCKKACRYEKGSWSECA-T 132

Query: 195 GEMSRTDKLKSNSDSTCD 248
           G+M+R DKLK++SD +C+
Sbjct: 133 GQMTRADKLKASSDPSCE 150



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 22/57 (38%), Positives = 33/57 (57%)
 Frame = +3

Query: 3   KNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSS 173
           K ++ACRY +G+WSEC +    R+ K  LK     +CE  + I+K CK     +KS+
Sbjct: 115 KCKKACRYEKGSWSECATGQMTRADK--LKASSDPSCEATRVIKKNCKPGKSKDKSA 169



 Score = 32.3 bits (70), Expect = 0.53
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 150 TCRYEKSSWSECSI-NGEMSRTDKLKSNSDSTCDQS 254
           +CRY K+ W+EC       SRT  LK   D  CDQ+
Sbjct: 75  SCRYGKNPWTECDTKTNTRSRTLTLK-KGDPACDQT 109


>AF215688-1|AAF22851.1|  279|Drosophila melanogaster Miple2 protein.
          Length = 279

 Score =  101 bits (242), Expect = 8e-22
 Identities = 45/98 (45%), Positives = 66/98 (67%)
 Frame = +3

Query: 3   KNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSE 182
           +N   CRY + AWS CD KTN+RSR L+L+KG+  NC   +TIQKKCK+ CRYEK  WS+
Sbjct: 154 ENGSTCRYAKSAWSNCDHKTNMRSRVLSLRKGE-QNCLPTRTIQKKCKKGCRYEKGEWSQ 212

Query: 183 CSINGEMSRTDKLKSNSDSTCDQSGAKLGNVTRISKSS 296
           C + G+++R DKL+  +    DQ+   +  V++  K++
Sbjct: 213 C-VGGQITREDKLEPEATGGSDQNCNPVRTVSKKCKAN 249


>AE014296-71|AAF47369.1|  279|Drosophila melanogaster CG18321-PA
           protein.
          Length = 279

 Score =  101 bits (242), Expect = 8e-22
 Identities = 45/98 (45%), Positives = 66/98 (67%)
 Frame = +3

Query: 3   KNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSE 182
           +N   CRY + AWS CD KTN+RSR L+L+KG+  NC   +TIQKKCK+ CRYEK  WS+
Sbjct: 154 ENGSTCRYAKSAWSNCDHKTNMRSRVLSLRKGE-QNCLPTRTIQKKCKKGCRYEKGEWSQ 212

Query: 183 CSINGEMSRTDKLKSNSDSTCDQSGAKLGNVTRISKSS 296
           C + G+++R DKL+  +    DQ+   +  V++  K++
Sbjct: 213 C-VGGQITREDKLEPEATGGSDQNCNPVRTVSKKCKAN 249


>AY071054-1|AAL48676.1|  279|Drosophila melanogaster RE13914p
           protein.
          Length = 279

 Score =   99 bits (238), Expect = 2e-21
 Identities = 44/98 (44%), Positives = 66/98 (67%)
 Frame = +3

Query: 3   KNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSE 182
           +N   CRY + AWS CD KTN+RSR L+L+KG+  NC   +TIQKKC++ CRYEK  WS+
Sbjct: 154 ENGSTCRYAKSAWSNCDHKTNMRSRVLSLRKGE-QNCLPTRTIQKKCEKGCRYEKGEWSQ 212

Query: 183 CSINGEMSRTDKLKSNSDSTCDQSGAKLGNVTRISKSS 296
           C + G+++R DKL+  +    DQ+   +  V++  K++
Sbjct: 213 C-VGGQITREDKLEPEATGGSDQNCNPVRTVSKKCKAN 249


>AY070538-1|AAL48009.1|  223|Drosophila melanogaster LD21194p
           protein.
          Length = 223

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   KNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTI-QKKCKRTCRYEKSSWS 179
           K+++ CR+      E DS   ++     L K DP+N E++ T+ + + +   +YE     
Sbjct: 18  KSKDFCRWPDEPLEEMDSTLAVQQYIQQLIKRDPSNVELILTMPEAQDEGVWKYEHLRQF 77

Query: 180 ECSINGEMSRTDKLKSNSDSTCDQSGA 260
              +NG   R    K  S STC Q  A
Sbjct: 78  CMELNGLAVRLQ--KECSPSTCTQMTA 102


>AE013599-208|AAM70816.1|  223|Drosophila melanogaster CG3403-PA
           protein.
          Length = 223

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   KNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTI-QKKCKRTCRYEKSSWS 179
           K+++ CR+      E DS   ++     L K DP+N E++ T+ + + +   +YE     
Sbjct: 18  KSKDFCRWPDEPLEEMDSTLAVQQYIQQLIKRDPSNVELILTMPEAQDEGVWKYEHLRQF 77

Query: 180 ECSINGEMSRTDKLKSNSDSTCDQSGA 260
              +NG   R    K  S STC Q  A
Sbjct: 78  CMELNGLAVRLQ--KECSPSTCTQMTA 102


>U18774-1|AAA89117.1| 1038|Drosophila melanogaster Sog protein.
          Length = 1038

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +3

Query: 18   CRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEK 167
            C   R + S C  +T + S++   +K D A   + +    +C+R+ R+ K
Sbjct: 978  CDRKRCSRSTCQQQTRVTSKRRLFEKPDAAAPAIDECCSTQCRRSRRHHK 1027


>BT023895-1|ABA81829.1| 1038|Drosophila melanogaster LP20363p protein.
          Length = 1038

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +3

Query: 18   CRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEK 167
            C   R + S C  +T + S++   +K D A   + +    +C+R+ R+ K
Sbjct: 978  CDRKRCSRSTCQQQTRVTSKRRLFEKPDAAAPAIDECCSTQCRRSRRHHK 1027


>AE014298-2182|AAF48481.1| 1038|Drosophila melanogaster CG9224-PA
            protein.
          Length = 1038

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +3

Query: 18   CRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEK 167
            C   R + S C  +T + S++   +K D A   + +    +C+R+ R+ K
Sbjct: 978  CDRKRCSRSTCQQQTRVTSKRRLFEKPDAAAPAIDECCSTQCRRSRRHHK 1027


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,881,301
Number of Sequences: 53049
Number of extensions: 416981
Number of successful extensions: 1478
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1449
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)