Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20843
(606 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g16610.2 68418.m01945 expressed protein 30 1.4
At5g16610.1 68418.m01944 expressed protein 30 1.4
At1g36390.2 68414.m04521 co-chaperone grpE family protein simila... 30 1.4
At1g36390.1 68414.m04520 co-chaperone grpE family protein simila... 30 1.4
At1g30900.1 68414.m03780 vacuolar sorting receptor, putative sim... 29 2.4
At5g51340.1 68418.m06366 expressed protein 29 3.2
At3g12340.1 68416.m01538 immunophilin, putative / FKBP-type pept... 28 4.2
At1g15940.1 68414.m01913 expressed protein similar To androgen-i... 28 4.2
At2g22795.1 68415.m02704 expressed protein 28 5.5
At4g31900.1 68417.m04533 chromatin remodeling factor, putative s... 27 7.3
At4g09310.1 68417.m01539 SPla/RYanodine receptor (SPRY) domain-c... 27 7.3
At4g09250.1 68417.m01532 SPla/RYanodine receptor (SPRY) domain-c... 27 7.3
At4g09200.1 68417.m01522 SPla/RYanodine receptor (SPRY) domain-c... 27 7.3
At5g48540.1 68418.m06001 33 kDa secretory protein-related contai... 27 9.6
At5g40140.1 68418.m04871 armadillo/beta-catenin repeat family pr... 27 9.6
At4g20940.1 68417.m03034 leucine-rich repeat family protein cont... 27 9.6
At3g26910.1 68416.m03367 hydroxyproline-rich glycoprotein family... 27 9.6
>At5g16610.2 68418.m01945 expressed protein
Length = 673
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +3
Query: 108 NCEVVKTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSGAKLGNV 275
+C+ + + K + +C +S S +G + + D + + S C +SG++LG +
Sbjct: 163 DCDETELYKIKAEISCENGIASSSGVQFSGFLEKIDSVLCRNFSICSESGSQLGGI 218
>At5g16610.1 68418.m01944 expressed protein
Length = 529
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +3
Query: 108 NCEVVKTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSGAKLGNV 275
+C+ + + K + +C +S S +G + + D + + S C +SG++LG +
Sbjct: 19 DCDETELYKIKAEISCENGIASSSGVQFSGFLEKIDSVLCRNFSICSESGSQLGGI 74
>At1g36390.2 68414.m04521 co-chaperone grpE family protein similar
to co-chaperone CGE1 precursor isoform b [Chlamydomonas
reinhardtii] GI:15384279; contains Pfam profile PF01025:
co-chaperone GrpE
Length = 279
Score = 29.9 bits (64), Expect = 1.4
Identities = 25/102 (24%), Positives = 46/102 (45%)
Frame = +3
Query: 45 ECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLK 224
+ D KT IRS K L GD + ++T+ CK K S++ +++ ++K
Sbjct: 72 QADVKTLIRSYKQALLNGDETSVTEIETM--FCKIEKEKNKMDQKVLSLSMKIASEKEMK 129
Query: 225 SNSDSTCDQSGAKLGNVTRISKSSLLKIRVAEIASKDMGCFE 350
+ D + KL + R+S S K+++ + + FE
Sbjct: 130 IRLQADFDNTRKKL-DKDRLSTESNAKVQILKSLLPIIDSFE 170
>At1g36390.1 68414.m04520 co-chaperone grpE family protein similar
to co-chaperone CGE1 precursor isoform b [Chlamydomonas
reinhardtii] GI:15384279; contains Pfam profile PF01025:
co-chaperone GrpE
Length = 279
Score = 29.9 bits (64), Expect = 1.4
Identities = 25/102 (24%), Positives = 46/102 (45%)
Frame = +3
Query: 45 ECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLK 224
+ D KT IRS K L GD + ++T+ CK K S++ +++ ++K
Sbjct: 72 QADVKTLIRSYKQALLNGDETSVTEIETM--FCKIEKEKNKMDQKVLSLSMKIASEKEMK 129
Query: 225 SNSDSTCDQSGAKLGNVTRISKSSLLKIRVAEIASKDMGCFE 350
+ D + KL + R+S S K+++ + + FE
Sbjct: 130 IRLQADFDNTRKKL-DKDRLSTESNAKVQILKSLLPIIDSFE 170
>At1g30900.1 68414.m03780 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 631
Score = 29.1 bits (62), Expect = 2.4
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +3
Query: 33 GAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSECSIN--GEMS 206
G W D K+N+ + K T + G C VV +Q K E + CSIN G S
Sbjct: 423 GCWE--DKKSNVTACKDTFR-GRVCECPVVNGVQYKGDGYTSCEPYGPARCSINQGGCWS 479
Query: 207 RTDK-LKSNSDSTCDQSGAK 263
T K L ++ S + SG +
Sbjct: 480 ETKKGLTFSACSNLETSGCR 499
>At5g51340.1 68418.m06366 expressed protein
Length = 726
Score = 28.7 bits (61), Expect = 3.2
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Frame = -3
Query: 289 LLILVTFPSFAPLWSQVESLLDFSLSVLDISP----LMLHSLQDDFS*RQVLLHFFWMVL 122
LL+L + PS L Q SLL +L P L++ +L+ S Q + + W
Sbjct: 74 LLLLKSIPSSYDLKFQNYSLLSHCYHLLASFPPQRNLLVKALELASSVPQDISAYLWSCN 133
Query: 121 TTSQLAGSPFFRVNFLERIFVLESHSLQAPR-TYRHASLFF 2
SQLA + + +F + LES L A + +FF
Sbjct: 134 FNSQLANTFIIQADFPSSLSALESGFLSASHICFPELQMFF 174
>At3g12340.1 68416.m01538 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative contains
Pfam profile: PF00254, FKBP-type peptidyl-prolyl
cis-trans isomerases
Length = 694
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 60 TNIRSRKLTLKKGDPANCEVVKTIQKK 140
T ++RK TL+ G+PA CE KT + K
Sbjct: 426 TRSKARKSTLESGEPAKCE--KTFEAK 450
>At1g15940.1 68414.m01913 expressed protein similar To
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]
Length = 990
Score = 28.3 bits (60), Expect = 4.2
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +3
Query: 72 SRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQ 251
++K T+KK +PA ++ K+ KK + + KSS E + NG + K
Sbjct: 438 AKKQTVKKTNPAKEDLTKSNVKKHEDGIKTGKSSKKEKADNGLAKTSAKKPLAETMMVKP 497
Query: 252 SGAKLGNVTRISKSS 296
SG KL + K+S
Sbjct: 498 SGKKLVHSDAKKKNS 512
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 27.9 bits (59), Expect = 5.5
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +3
Query: 45 ECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLK 224
+ D K NI + KGD A+ EVV ++K + EK + I E +K
Sbjct: 287 DIDEKANIEEARENNYKGDDASSEVVHESEEKTSESENSEKVE-DKSGIKTEEVEDSVIK 345
Query: 225 SNSDSTCD 248
S +T D
Sbjct: 346 SVLPNTTD 353
>At4g31900.1 68417.m04533 chromatin remodeling factor, putative strong
similarity to chromatin remodeling factor CHD3 (PICKLE)
[Arabidopsis thaliana] GI:6478518; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1202
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 321 IASKDMGCFENFTIIINEQCLFVDSHLYLSLVPSSYIAKYEI 446
I+S ++ F +++ E+C F+D+H + + I+KY +
Sbjct: 965 ISSDELLVSMTFMMLVKEKCQFLDNHPTAPVFSNYVISKYNL 1006
>At4g09310.1 68417.m01539 SPla/RYanodine receptor (SPRY)
domain-containing protein low similarity to RanBPM [Homo
sapiens] GI:15080674; contains Pfam profile PF00622:
SPRY domain
Length = 397
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 147 RTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSGAKLGNVTR 281
R+C Y +S CS NG+ RT S++ +T D G + +V++
Sbjct: 91 RSCAYIGNSGLICSQNGDGDRTVAKASDTYTTGDLVGCGIDSVSQ 135
>At4g09250.1 68417.m01532 SPla/RYanodine receptor (SPRY)
domain-containing protein low similarity to RanBPM [Homo
sapiens] GI:15080674; contains Pfam profile PF00622:
SPRY domain
Length = 427
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 147 RTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSGAKLGNVTR 281
R+C Y +S CS NG+ RT S++ +T D G + +V++
Sbjct: 169 RSCAYIGNSGLICSQNGDGDRTVAKASDTYTTGDLVGCGIDSVSQ 213
>At4g09200.1 68417.m01522 SPla/RYanodine receptor (SPRY)
domain-containing protein low similarity to RanBPM [Homo
sapiens] GI:15080674; contains Pfam profile PF00622:
SPRY domain
Length = 397
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 147 RTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSGAKLGNVTR 281
R+C Y +S CS NG+ RT S++ +T D G + +V++
Sbjct: 91 RSCAYIGNSGLICSQNGDGDRTVAKASDTYTTGDLVGCGIDSVSQ 135
>At5g48540.1 68418.m06001 33 kDa secretory protein-related contains
Pfam PF01657: Domain of unknown function, duplicated in
33 KDa secretory proteins
Length = 263
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 150 TCRYEKSSWSECSINGEMSRTDKLKSNSDS 239
+CR S W C+ N +S + ++ N DS
Sbjct: 17 SCRAADSIWQLCNTNSNISASSQVSKNIDS 46
>At5g40140.1 68418.m04871 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 550
Score = 27.1 bits (57), Expect = 9.6
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Frame = +3
Query: 123 KTIQKKCKRTCRYEKSSWSECSINGEMSRTD-----KLKSNSDSTCDQSGAKLGNVTRIS 287
+T+Q K +C SS S+ ++ + KLKSN S +++ + +TRI
Sbjct: 200 RTLQLTTKPSCFSSPSSGEIESLEPNLTPEEEALLTKLKSNRISEIEEALISIRRITRID 259
Query: 288 KSSLLKIRVAEIAS--KDMGCFENFTIIINEQCLFVDSHL 401
+SS + + + S K + T+ +N + V+ L
Sbjct: 260 ESSRISLCTTRVISALKSLIVSRYATVQVNVTAVLVNLSL 299
>At4g20940.1 68417.m03034 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to leucine-rich
repeat receptor-like protein kinase INRPK1 [Ipomoea nil]
gi|14495542|gb|AAB36558
Length = 977
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 168 SSWSECSINGEMSRTDKLKSNSDSTCDQSGAKLGNVTRISKSSLLKIRVAEIASKDMGCF 347
SSW+ NG + + N T D + N+T++ K S+ ++ + D+G F
Sbjct: 43 SSWNGIVCNGG-NVAGVVLDNLGLTADADFSLFSNLTKLVKLSMSNNSLSGVLPNDLGSF 101
Query: 348 ENFTIIINEQCLFVDS 395
++ + LF S
Sbjct: 102 KSLQFLDLSDNLFSSS 117
>At3g26910.1 68416.m03367 hydroxyproline-rich glycoprotein family
protein common family member:At2g33490 [Arabidopsis
thaliana]
Length = 608
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 21 RYVRGAWSECDSKTNIRSRKLTLKKGDP 104
RYV +CD K N+ L +KG P
Sbjct: 129 RYVEDMKQQCDGKRNVYEMSLVKEKGRP 156
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,342,309
Number of Sequences: 28952
Number of extensions: 205014
Number of successful extensions: 561
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1206913392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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