Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20839X
         (302 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    24   0.40 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   1.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   2.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   2.8  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    19   8.7  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    19   8.7  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    19   8.7  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.8 bits (49), Expect = 0.40
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +1

Query: 178 WPPERCPXRXAYA-FEPXRHELQPPENDPDRNPSGNINPSV 297
           +PP        YA + P  +   PP   P +NP  N+NP V
Sbjct: 162 YPPPPPVYTHHYARYHPYPNFGVPPAGIPLQNPGLNLNPPV 202


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 10  LGIIPSVLLVMFLVYYSRH 66
           +G+I + ++V+F +YY  H
Sbjct: 252 IGLIKNCVIVIFELYYLSH 270


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
 Frame = +1

Query: 223 PXRHELQPPENDPDRNPSGNINP-SVN 300
           P  H  QPP N    NP    NP SVN
Sbjct: 739 PHPHH-QPPRNPVGTNPHDINNPLSVN 764


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
 Frame = +1

Query: 223 PXRHELQPPENDPDRNPSGNINP-SVN 300
           P  H  QPP N    NP    NP SVN
Sbjct: 631 PHPHH-QPPRNPVGTNPHDINNPLSVN 656


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 186 WGPFWKLAANLLAL 145
           WGP W L   L A+
Sbjct: 285 WGPEWNLLDGLDAV 298


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 186 WGPFWKLAANLLAL 145
           WGP W L   L A+
Sbjct: 286 WGPEWNLLDGLDAV 299


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 186 WGPFWKLAANLLAL 145
           WGP W L   L A+
Sbjct: 286 WGPEWNLLDGLDAV 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,094
Number of Sequences: 336
Number of extensions: 1007
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)