Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20839X
(302 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 28 1.5
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 27 2.6
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z34799-3|CAA84316.3| 539|Caenorhabditis elegans Hypothetical pr... 26 4.5
AF000299-7|AAC47982.1| 168|Caenorhabditis elegans Hypothetical ... 26 4.5
Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 26 6.0
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 26 6.0
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 26 6.0
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 26 6.0
Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical pr... 25 7.9
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +2
Query: 134 TGSRSASKFAANFQNGPQNGAXPVVHTPSNPDDMSSSLLRTIPTGTRQVTSTHPS 298
T SRSASK A + + P TPS+ S S R PT +++++ PS
Sbjct: 56 TPSRSASKSATRGRTASKTPKTPS-KTPSSASARSRSRSRGRPTNASRLSASTPS 109
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 167 NFQNGPQNGAXPVVHTPSNPDDMSSSLLRTIPTGTRQ 277
N + N PVV+TP +P +S L +T + T++
Sbjct: 556 NLEKTMINQVPPVVNTPPSPQQTASQLKKTPTSATKR 592
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 167 NFQNGPQNGAXPVVHTPSNPDDMSSSLLRTIPTGTRQ 277
N + N PVV+TP +P +S L +T + T++
Sbjct: 556 NLEKTMINQVPPVVNTPPSPQQTASQLKKTPTSATKR 592
>Z34799-3|CAA84316.3| 539|Caenorhabditis elegans Hypothetical
protein F34D10.6 protein.
Length = 539
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 143 RSASKFAANFQNGPQNGAXPVVHTPSNPDDM 235
R ASK A +F N NG + H P+ P+ +
Sbjct: 120 RFASKSAEDFNNDIINGTLDMSHVPNIPEHL 150
>AF000299-7|AAC47982.1| 168|Caenorhabditis elegans Hypothetical
protein E03H12.7 protein.
Length = 168
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 157 IRCQFPKWPPERCPXRXAYAFEPXRHELQPPENDP 261
I C+ K P P + + EP + ++PP DP
Sbjct: 25 ILCKGKKKPSNASPSKKMSSAEPAKSAIKPPITDP 59
>Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical
protein F23B12.7 protein.
Length = 953
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 10/39 (25%)
Frame = +2
Query: 146 SASKFAANFQNGP---------QNGAX-PVVHTPSNPDD 232
SA K A F++G QNGA PV H P+NP++
Sbjct: 38 SAEKIMAQFESGAVHTNKKKQAQNGAAKPVAHKPANPEN 76
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 125 ASSTGSRSASKFAANFQNGPQNGAXPVVHTPSNPDDMSSSLLRTIPTGTRQVTSTHPSI 301
++STG+ S+S + Q A VHT + M +S ++ +G + V++T P +
Sbjct: 487 SASTGTTSSSSRFTSSTPSSQRSAAGSVHTETPRSSMENS--SSVGSGDQNVSATIPIV 543
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 125 ASSTGSRSASKFAANFQNGPQNGAXPVVHTPSNPDDMSSSLLRTIPTGTRQVTSTHPSI 301
++STG+ S+S + Q A VHT + M +S ++ +G + V++T P +
Sbjct: 487 SASTGTTSSSSRFTSSTPSSQRSAAGSVHTETPRSSMENS--SSVGSGDQNVSATIPIV 543
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 125 ASSTGSRSASKFAANFQNGPQNGAXPVVHTPSNPDDMSSSLLRTIPTGTRQVTSTHPSI 301
++STG+ S+S + Q A VHT + M +S ++ +G + V++T P +
Sbjct: 487 SASTGTTSSSSRFTSSTPSSQRSAAGSVHTETPRSSMENS--SSVGSGDQNVSATIPIV 543
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 125 ASSTGSRSASKFAANFQNGPQNGAXPVVHTPSNPDDMSSSLLRTIPTGTRQVTSTHPSI 301
++STG+ S+S + Q A VHT + M +S ++ +G + V++T P +
Sbjct: 487 SASTGTTSSSSRFTSSTPSSQRSAAGSVHTETPRSSMENS--SSVGSGDQNVSATIPIV 543
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 125 ASSTGSRSASKFAANFQNGPQNGAXPVVHTPSNPDDMSSSLLRTIPTGTRQVTSTHPSI 301
++STG+ S+S + Q A VHT + M +S ++ +G + V++T P +
Sbjct: 487 SASTGTTSSSSRFTSSTPSSQRSAAGSVHTETPRSSMENS--SSVGSGDQNVSATIPIV 543
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 125 ASSTGSRSASKFAANFQNGPQNGAXPVVHTPSNPDDMSSSLLRTIPTGTRQVTSTHPSI 301
++STG+ S+S + Q A VHT + M +S ++ +G + V++T P +
Sbjct: 487 SASTGTTSSSSRFTSSTPSSQRSAAGSVHTETPRSSMENS--SSVGSGDQNVSATIPIV 543
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 125 ASSTGSRSASKFAANFQNGPQNGAXPVVHTPSNPDDMSSSLLRTIPTGTRQVTSTHPSI 301
++STG+ S+S + Q A VHT + M +S ++ +G + V++T P +
Sbjct: 487 SASTGTTSSSSRFTSSTPSSQRSAAGSVHTETPRSSMENS--SSVGSGDQNVSATIPIV 543
>Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical
protein K02E2.8a protein.
Length = 188
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 212 TPSNPDDMSSSLLRTIPTGTRQVTSTHP 295
TP NP ++++ + PT T +T+T+P
Sbjct: 21 TPLNPGTITTTTTISAPTTTVPITTTNP 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,809,876
Number of Sequences: 27780
Number of extensions: 96352
Number of successful extensions: 385
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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