Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20839X
(302 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to b... 29 0.79
At5g11460.1 68418.m01338 senescence-associated protein-related s... 27 1.8
At3g21630.1 68416.m02728 protein kinase family protein contains ... 27 1.8
At1g30560.1 68414.m03739 transporter, putative similar to glycer... 27 3.2
At4g29210.2 68417.m04178 gamma-glutamyltranspeptidase family pro... 26 4.2
At4g29210.1 68417.m04179 gamma-glutamyltranspeptidase family pro... 26 4.2
At3g16150.1 68416.m02039 L-asparaginase, putative / L-asparagine... 26 5.6
At2g30980.1 68415.m03778 shaggy-related protein kinase delta / A... 26 5.6
At1g06390.2 68414.m00676 shaggy-related protein kinase iota / AS... 26 5.6
At1g06390.1 68414.m00675 shaggy-related protein kinase iota / AS... 26 5.6
At4g18710.1 68417.m02766 shaggy-related protein kinase eta / ASK... 25 7.4
At3g24600.1 68416.m03090 hypothetical protein 25 7.4
At3g22380.1 68416.m02825 expressed protein 25 7.4
At5g35604.1 68418.m04242 hypothetical protein 25 9.7
At4g34310.2 68417.m04876 expressed protein 25 9.7
At4g34310.1 68417.m04877 expressed protein 25 9.7
>At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to
beta-1,3-glucanase-like protein (GI:14279169) [Olea
europaea] similar to Glucan endo-1,3-beta-glucosidase
precursor (EC 3.2.1.39) ((1-3)-beta- glucan
endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3-
endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]
Length = 197
Score = 28.7 bits (61), Expect = 0.79
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +2
Query: 125 ASSTGSRSASKFAANFQNGPQNGAXPVVHTPSNPDDMSSSLLRTIPTGTRQVTSTHP 295
A GS + S A N P N A ++ PS+P S T PTGT T P
Sbjct: 78 AQVPGSCNFSGTATTNPNPPSNLANGCIY-PSSPSSTRSPPSTTPPTGTTPTNGTTP 133
>At5g11460.1 68418.m01338 senescence-associated protein-related
similar to senescence-associated protein SAG102
(GI:22331931) [Arabidopsis thaliana]
Length = 344
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 267 PVGIVLRRLELMSSGFEGVCTTGWAPFWGP 178
PV +R +L+SS FEG C + + W P
Sbjct: 20 PVLSAIRSHKLISSVFEGKCPSDYESAWSP 49
>At3g21630.1 68416.m02728 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 617
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/19 (47%), Positives = 17/19 (89%)
Frame = +1
Query: 4 IFLGIIPSVLLVMFLVYYS 60
I +G+I ++LL++F+VYY+
Sbjct: 238 IVIGVIVALLLILFIVYYA 256
>At1g30560.1 68414.m03739 transporter, putative similar to
glycerol-3-phosphate transporter (glycerol 3-phosphate
permease) [Homo sapiens] GI:7543982
Length = 510
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 273 RVPVGIVLRRLELMSSG-FEGVCTTGWAPFWGP 178
R P IV L +G F+G GWAPF GP
Sbjct: 55 RKPNSIVKGTLSEQPTGHFKGADKGGWAPFDGP 87
>At4g29210.2 68417.m04178 gamma-glutamyltranspeptidase family
protein similar to SP|P07314
Gamma-glutamyltranspeptidase precursor (EC 2.3.2.2)
(Gamma- glutamyltransferase) (GGT) {Rattus norvegicus};
contains Pfam profilePF01019:
Gamma-glutamyltranspeptidase
Length = 512
Score = 26.2 bits (55), Expect = 4.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 126 PPAPDRGVQANSLPISKMAPRTV 194
PPAP ++ N P+S M P +
Sbjct: 473 PPAPTNFIEPNKRPLSSMTPLVI 495
>At4g29210.1 68417.m04179 gamma-glutamyltranspeptidase family
protein similar to SP|P07314
Gamma-glutamyltranspeptidase precursor (EC 2.3.2.2)
(Gamma- glutamyltransferase) (GGT) {Rattus norvegicus};
contains Pfam profilePF01019:
Gamma-glutamyltranspeptidase
Length = 637
Score = 26.2 bits (55), Expect = 4.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 126 PPAPDRGVQANSLPISKMAPRTV 194
PPAP ++ N P+S M P +
Sbjct: 473 PPAPTNFIEPNKRPLSSMTPLVI 495
>At3g16150.1 68416.m02039 L-asparaginase, putative / L-asparagine
amidohydrolase, putative similar to Swiss-Prot:P30364
L-asparaginase (EC 3.5.1.1) (L-asparagine
amidohydrolase) [Lupinus angustifolius]
Length = 325
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 132 APDRGVQANSLPISKMAPRTV 194
A D +Q N LPIS AP TV
Sbjct: 176 ATDSPIQMNGLPISIYAPETV 196
>At2g30980.1 68415.m03778 shaggy-related protein kinase delta /
ASK-delta / ASK-dzeta (ASK4) identical to shaggy-related
protein kinase delta (ASK-delta) (ASK- dzeta)
[Arabidopsis thaliana] SWISS-PROT:Q39010
Length = 412
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 151 KQIRCQFPKWPPERCPXRXAYAFEPXRHELQPPE 252
++IRC P + R P A+ + H+ PPE
Sbjct: 295 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPE 328
>At1g06390.2 68414.m00676 shaggy-related protein kinase iota /
ASK-iota (ASK9) (GSK1) identical to shaggy-related
protein kinase iota (ASK-iota) [Arabidopsis thaliana]
SWISS-PROT:Q39012
Length = 407
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 151 KQIRCQFPKWPPERCPXRXAYAFEPXRHELQPPE 252
++IRC P + R P A+ + H+ PPE
Sbjct: 293 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPE 326
>At1g06390.1 68414.m00675 shaggy-related protein kinase iota /
ASK-iota (ASK9) (GSK1) identical to shaggy-related
protein kinase iota (ASK-iota) [Arabidopsis thaliana]
SWISS-PROT:Q39012
Length = 407
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 151 KQIRCQFPKWPPERCPXRXAYAFEPXRHELQPPE 252
++IRC P + R P A+ + H+ PPE
Sbjct: 293 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPE 326
>At4g18710.1 68417.m02766 shaggy-related protein kinase eta /
ASK-eta (ASK7) identical to shaggy-related protein
kinase eta (ASK-eta) [Arabidopsis thaliana]
SWISS-PROT:Q39011
Length = 380
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 151 KQIRCQFPKWPPERCPXRXAYAFEPXRHELQPPE 252
++IRC P + R P A+ + H+ PPE
Sbjct: 263 EEIRCMNPHYTDFRFPQIKAHPWHKIFHKRMPPE 296
>At3g24600.1 68416.m03090 hypothetical protein
Length = 506
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 206 VHTPSNPDDMSSSLLRTIPTGTRQVTSTHPSI 301
V +PS D SSS+ T T + +HPSI
Sbjct: 26 VQSPSRDSDKSSSVALTTHQTTPTESPSHPSI 57
>At3g22380.1 68416.m02825 expressed protein
Length = 1550
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 194 AXPVVHTPSNPDDMSSSLLRTIPTGTRQ 277
A P P++P S S+ + +P+GT+Q
Sbjct: 259 ASPSPPAPTSPSSSSISVRKKLPSGTKQ 286
>At5g35604.1 68418.m04242 hypothetical protein
Length = 298
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 202 RXAYAFEPXRHELQPPENDPDRNPSGNINP 291
R AYAF P H P R GN +P
Sbjct: 52 RSAYAFRPTLHREHRGGRSPRRPSRGNSSP 81
>At4g34310.2 68417.m04876 expressed protein
Length = 1035
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 146 SASKFAANFQNGPQNGAXPVVHTPSNPDDMSSSLLRTIPT 265
S+S N +GP TPS P S LLR+I T
Sbjct: 25 SSSSAPTNGSSGPSLNLIKPKLTPSPPPHQSRGLLRSIYT 64
>At4g34310.1 68417.m04877 expressed protein
Length = 1228
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 146 SASKFAANFQNGPQNGAXPVVHTPSNPDDMSSSLLRTIPT 265
S+S N +GP TPS P S LLR+I T
Sbjct: 25 SSSSAPTNGSSGPSLNLIKPKLTPSPPPHQSRGLLRSIYT 64
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,547,925
Number of Sequences: 28952
Number of extensions: 92017
Number of successful extensions: 305
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 301317600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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