Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20838
         (453 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB158503-1|BAD69710.1|  151|Homo sapiens splice variant of four ...    31   2.4  
AK000943-1|BAA91437.1|  530|Homo sapiens protein ( Homo sapiens ...    29   7.4  

>AB158503-1|BAD69710.1|  151|Homo sapiens splice variant of four and
           a half LIM domain protein 2 protein.
          Length = 151

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 111 WSTPINFGSRAPRTSSGIVSQLSSDLSSPKT-RLSLC 218
           WST    G R   +++   SQL   +SSPKT R+S+C
Sbjct: 57  WSTRAAAGMRPASSATAASSQLEPRVSSPKTIRISVC 93


>AK000943-1|BAA91437.1|  530|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10081 fis, clone HEMBA1002018. ).
          Length = 530

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +3

Query: 141 APRTSSGIVSQLSSDLSSPKTRLSLCTSATVS 236
           +P  S G+ S  SS  SSPKT+++  TSA  S
Sbjct: 436 SPSGSEGLSSVSSSPTSSPKTKVTTVTSAQKS 467


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,246,333
Number of Sequences: 237096
Number of extensions: 1133397
Number of successful extensions: 3056
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3056
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)