Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20837
         (338 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   0.85 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    20   6.0  
AM269505-4|CAK30051.1|   23|Tribolium castaneum mlpt peptide 4 p...    20   6.0  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.0 bits (47), Expect = 0.85
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 254 GRITCDEVSSWQRQPTANNRPTLLVGRR 171
           GR+T +++   +  PT   RPT +  R+
Sbjct: 237 GRLTDEQLKELENPPTPKPRPTKVSRRK 264


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 80  SRGCGPRPETRGLRRVYLQLGTAILC 3
           SRG  PR + + ++  ++ +   ILC
Sbjct: 238 SRGLIPRAKVKTIKITFVIVSVFILC 263


>AM269505-4|CAK30051.1|   23|Tribolium castaneum mlpt peptide 4
          protein.
          Length = 23

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 80 SRGCGPRPETRGLRR 36
          +RG G RPET   RR
Sbjct: 5  NRGDGGRPETSSGRR 19


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,730
Number of Sequences: 336
Number of extensions: 1505
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)