Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20837
(338 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38608| Best HMM Match : Peptidase_C2 (HMM E-Value=0) 95 1e-20
SB_31652| Best HMM Match : Peptidase_C2 (HMM E-Value=0) 68 2e-12
SB_53237| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 7e-12
SB_31653| Best HMM Match : Peptidase_C2 (HMM E-Value=4.5e-09) 52 2e-07
SB_54156| Best HMM Match : Peptidase_C2 (HMM E-Value=0) 42 1e-04
SB_54605| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0) 28 2.2
SB_23830| Best HMM Match : Glyoxalase (HMM E-Value=4.1e-08) 28 2.2
SB_23960| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24) 27 2.9
SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0) 27 3.9
SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08) 27 3.9
SB_48946| Best HMM Match : RVT_1 (HMM E-Value=1.49939e-43) 26 6.8
SB_47293| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4e-06) 26 6.8
SB_33901| Best HMM Match : RVT_1 (HMM E-Value=5.5e-30) 26 6.8
SB_30626| Best HMM Match : Kelch_1 (HMM E-Value=1e-17) 26 6.8
SB_18387| Best HMM Match : Utp12 (HMM E-Value=1.1e-06) 26 6.8
SB_15964| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-15) 26 6.8
SB_15148| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-15) 26 6.8
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.8
SB_26186| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_7843| Best HMM Match : DUF740 (HMM E-Value=0.5) 26 9.0
SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35) 26 9.0
>SB_38608| Best HMM Match : Peptidase_C2 (HMM E-Value=0)
Length = 842
Score = 95.5 bits (227), Expect = 1e-20
Identities = 41/82 (50%), Positives = 56/82 (68%)
Frame = +2
Query: 2 DIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFDVQ 181
D+R + + G+ FED EF A+D S+++ + RP W RP +I ++P +FV G SR D+Q
Sbjct: 198 DVRRQVRSTGKPFEDDEFLAIDSSIFFSKRPPRPFEWKRPSDICEDPHMFVGGASRLDIQ 257
Query: 182 QGELGDCWLLAAVANLTLHRKL 247
QG LGDCWLLAA+A LT H L
Sbjct: 258 QGMLGDCWLLAAIAALTQHSAL 279
>SB_31652| Best HMM Match : Peptidase_C2 (HMM E-Value=0)
Length = 1133
Score = 67.7 bits (158), Expect = 2e-12
Identities = 33/76 (43%), Positives = 48/76 (63%)
Frame = +2
Query: 5 IRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQ 184
++ + L RLFED +FPA +R L+ + + I W RP EIS +PQ G+S DV Q
Sbjct: 15 LQRQLLNSKRLFEDRDFPASNRVLFTRRRSVQLI-WKRPHEISKSPQFIARGFSSSDVAQ 73
Query: 185 GELGDCWLLAAVANLT 232
G + +CW +AA+A+LT
Sbjct: 74 GRIRNCWFVAALADLT 89
Score = 39.9 bits (89), Expect = 5e-04
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 208 VGCRCQLDTSSQVILPVVPDDQSFXE-DYAGVFHFRFWLYGRWV 336
V L T+ ++ V P DQSF Y G+F F FW +G WV
Sbjct: 82 VAALADLTTNIDLLHHVCPPDQSFEPGSYCGMFRFNFWQFGEWV 125
>SB_53237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 66.1 bits (154), Expect = 7e-12
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = +2
Query: 5 IRSRCLAEGRLFEDPEFPAVDRSLYYKESLD-RPITWLRPGEISDN--PQLFVEGYSRFD 175
+++ C +LF D F SLYY S P+ W RP EI P LFV+G D
Sbjct: 15 LKAECEKNEQLFVDSVFKPETSSLYYSRSCPPEPVEWKRPSEICHPAVPHLFVDGADSHD 74
Query: 176 VQQGELGDCWLLAAVANLTLHRKLFFQL 259
V QG+LG+CW +AA ++L L L +++
Sbjct: 75 VTQGKLGNCWFVAACSSLALRPFLLYKV 102
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 268 DQSFXEDYAGVFHFRFWLYGRW 333
D E+Y G+F FRF+ G W
Sbjct: 112 DPKKPENYQGIFRFRFYRQGEW 133
>SB_31653| Best HMM Match : Peptidase_C2 (HMM E-Value=4.5e-09)
Length = 208
Score = 51.6 bits (118), Expect = 2e-07
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2
Query: 125 EISDNPQLFVEGYSRFDVQQGELGDCWLLAAVANLTLHRKL 247
EI P+ +V+G SR D++QG LG+CWLLAA++ L H+ L
Sbjct: 97 EICSEPRFYVDGASRLDIKQGVLGNCWLLAAMSVLAQHKPL 137
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 277 FXEDYAGVFHFRFWLYGRWV 336
F Y G F+ W YG WV
Sbjct: 152 FSPRYTGKVVFKLWQYGEWV 171
>SB_54156| Best HMM Match : Peptidase_C2 (HMM E-Value=0)
Length = 1001
Score = 42.3 bits (95), Expect = 1e-04
Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 11/99 (11%)
Frame = +2
Query: 17 CLAEGRLFEDPEFPAVDRSLYYK---ESLDRPITWLRPGEISDN--------PQLFVEGY 163
C + F D FP V +SLY R WLRP EI DN P
Sbjct: 431 CKTQEIQFVDDSFPPVLKSLYINPRHSEHPRVADWLRPNEI-DNFSTCRTNIPWAVFRNP 489
Query: 164 SRFDVQQGELGDCWLLAAVANLTLHRKLFFQLYLMIRVS 280
D+ QG LGDCW L+++A L +L ++ + VS
Sbjct: 490 RPSDIIQGVLGDCWFLSSLAVLAERPELLEKILITREVS 528
>SB_54605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 217 RCQLDTSSQVILPVVPDDQSFXED 288
+C+L ++ Q ILPV+PDD S D
Sbjct: 273 KCRLVSTGQSILPVLPDDLSSRTD 296
>SB_59638| Best HMM Match : HNF-1_N (HMM E-Value=0)
Length = 808
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 80 YKESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQGELGDCWLLAAVANL 229
++E++ PI PG+ Q FV+ Y VQ L ++ A++NL
Sbjct: 724 WEETIKMPINEPAPGKRKSQIQEFVDYYGTAGVQHIALNTSDIITAISNL 773
>SB_23830| Best HMM Match : Glyoxalase (HMM E-Value=4.1e-08)
Length = 306
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 80 YKESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQGELGDCWLLAAVANL 229
++E++ PI PG+ Q FV+ Y VQ L ++ A++NL
Sbjct: 157 WEETIKMPINEPAPGKRKSQIQEFVDYYGTAGVQHIALNTSDIITAISNL 206
>SB_23960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = -2
Query: 196 AQLSLLDVEATVAFDEQLRVVADFPRSEPSDGPVQALLVVEAAVHGRKLGVFEESTFS*A 17
AQLS+ D+ A R + P + + VVE HG LG+ + T
Sbjct: 13 AQLSMKDISAISLRQHYQRKLPQLPECSARKRSTRCMPVVELGFHGIILGLPKRQTLQDT 72
Query: 16 P 14
P
Sbjct: 73 P 73
>SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24)
Length = 429
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 95 PGSPCSRGCGPRPETRGLRRVY 30
PG CS+ CG +TR LR +Y
Sbjct: 365 PGHGCSKSCGDGVKTRELRCLY 386
>SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0)
Length = 1291
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 214 CRCQLDTSSQVILPVVPDDQSFXEDYAGV 300
CR Q+DT ++ V P+D+ F + G+
Sbjct: 601 CRGQVDTIRGILFRVTPEDKEFVDTIRGM 629
>SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08)
Length = 816
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 319 ARNGNGRRPHNLHXNSDH 266
ARNGNG + H N DH
Sbjct: 32 ARNGNGTTSYTRHMNGDH 49
>SB_48946| Best HMM Match : RVT_1 (HMM E-Value=1.49939e-43)
Length = 1074
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2
Query: 337 PPSARIARNGNGRRPHN 287
PPSA +A+ NGRRPH+
Sbjct: 11 PPSAAVAK--NGRRPHS 25
>SB_47293| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4e-06)
Length = 744
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2
Query: 337 PPSARIARNGNGRRPHN 287
PPSA +A+ NGRRPH+
Sbjct: 128 PPSAAVAK--NGRRPHS 142
>SB_33901| Best HMM Match : RVT_1 (HMM E-Value=5.5e-30)
Length = 841
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2
Query: 337 PPSARIARNGNGRRPHN 287
PPSA +A+ NGRRPH+
Sbjct: 11 PPSAAVAK--NGRRPHS 25
>SB_30626| Best HMM Match : Kelch_1 (HMM E-Value=1e-17)
Length = 341
Score = 26.2 bits (55), Expect = 6.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 28 R*TLRRPRVSGRGPQPLLQGEPGQAHHLAQT 120
R T RP +S + P+ L G P +HH A T
Sbjct: 63 RITPSRPAISHQFPRGKLCGPPSLSHHTATT 93
>SB_18387| Best HMM Match : Utp12 (HMM E-Value=1.1e-06)
Length = 457
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 61 RGPQPLLQGEPGQAHHLAQTW 123
RG + + QGE +A HLA TW
Sbjct: 338 RGSRHVDQGEWSRARHLADTW 358
>SB_15964| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-15)
Length = 602
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2
Query: 337 PPSARIARNGNGRRPHN 287
PPSA +A+ NGRRPH+
Sbjct: 11 PPSAAVAK--NGRRPHS 25
>SB_15148| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-15)
Length = 683
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2
Query: 337 PPSARIARNGNGRRPHN 287
PPSA +A+ NGRRPH+
Sbjct: 11 PPSAAVAK--NGRRPHS 25
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 34 TLRRPRVSGRGPQPLLQGEPGQAHHL 111
TLR P RGP P LQ + H+
Sbjct: 662 TLRHPVPQNRGPVPALQSQEHTTEHM 687
>SB_26186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 25.8 bits (54), Expect = 9.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 136 VADFPRSEPSDGPVQALLVVEAAVHGRKLGVFEEST 29
VADF RS DG ++ + + HG + G E+T
Sbjct: 157 VADFLRSLKRDGLLENTMFIVMGDHGPRFGGTRETT 192
>SB_7843| Best HMM Match : DUF740 (HMM E-Value=0.5)
Length = 1362
Score = 25.8 bits (54), Expect = 9.0
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 44 DPEFPAVDRSLYYKESLDRPITWLRP-GEISDNPQLFVEGYSRFDV 178
DP+ V + ++ KES+ P + + P G+++ N Q RFD+
Sbjct: 1004 DPQIRRVGQDIFLKESMTLPKSGVTPNGKLTPNVQKL--SLQRFDI 1047
>SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35)
Length = 844
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 60 AGNSGSSKSLPSARHRD 10
AG+ SS S PS++HRD
Sbjct: 206 AGSPSSSSSTPSSKHRD 222
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,765,720
Number of Sequences: 59808
Number of extensions: 201275
Number of successful extensions: 530
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 485763447
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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