Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20837
(338 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024214-10|AAF36080.1| 778|Caenorhabditis elegans Calpain fami... 120 2e-28
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 113 3e-26
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 113 3e-26
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 113 3e-26
AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain famil... 108 9e-25
AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain famil... 108 9e-25
AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain famil... 103 2e-23
AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical ... 82 1e-16
Z82277-1|CAB05248.1| 648|Caenorhabditis elegans Hypothetical pr... 74 2e-14
U12921-1|AAB60256.1| 648|Caenorhabditis elegans sex determinati... 74 2e-14
AF040660-1|AAC71148.1| 634|Caenorhabditis elegans Hypothetical ... 36 0.007
Z73971-12|CAC42267.1| 718|Caenorhabditis elegans Hypothetical p... 32 0.091
Z72515-6|CAA96686.2| 718|Caenorhabditis elegans Hypothetical pr... 32 0.091
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 28 2.0
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 27 2.6
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ... 27 4.5
U80023-4|AAG24038.1| 318|Caenorhabditis elegans Serpentine rece... 26 6.0
>AC024214-10|AAF36080.1| 778|Caenorhabditis elegans Calpain family
protein 7 protein.
Length = 778
Score = 120 bits (290), Expect = 2e-28
Identities = 56/84 (66%), Positives = 64/84 (76%)
Frame = +2
Query: 8 RSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQG 187
R RCL + LFEDP+FPA D SLYYK D PI W RPGEI +NPQL V SRFDV+QG
Sbjct: 301 RQRCLDQRCLFEDPQFPANDSSLYYKTRPDEPIIWKRPGEIYENPQLIVGEKSRFDVKQG 360
Query: 188 ELGDCWLLAAVANLTLHRKLFFQL 259
LGDCWLLAAVANLTL +LF+++
Sbjct: 361 ALGDCWLLAAVANLTLRDELFYRV 384
Score = 54.8 bits (126), Expect = 1e-08
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +1
Query: 226 LDTSSQVILPVVPDDQSFXEDYAGVFHFRFWLYGRWV 336
L ++ VVP DQSF E+YAG+FHF+FW YG+WV
Sbjct: 374 LTLRDELFYRVVPPDQSFTENYAGIFHFQFWRYGQWV 410
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 113 bits (272), Expect = 3e-26
Identities = 50/86 (58%), Positives = 65/86 (75%)
Frame = +2
Query: 2 DIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFDVQ 181
++R +CL RLFEDP+F A D SL++ + + + WLRPGEI+ PQL EG+SRFDV
Sbjct: 259 ELRDQCLESKRLFEDPQFLANDSSLFFSKRPPKRVEWLRPGEITREPQLITEGHSRFDVI 318
Query: 182 QGELGDCWLLAAVANLTLHRKLFFQL 259
QGELGDCWLLAA ANLTL +LF+++
Sbjct: 319 QGELGDCWLLAAAANLTLKDELFYRV 344
Score = 55.6 bits (128), Expect = 9e-09
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +1
Query: 226 LDTSSQVILPVVPDDQSFXEDYAGVFHFRFWLYGRWV 336
L ++ VVP DQSF E+YAG+FHF+FW YG+WV
Sbjct: 334 LTLKDELFYRVVPPDQSFTENYAGIFHFQFWQYGKWV 370
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 113 bits (272), Expect = 3e-26
Identities = 50/86 (58%), Positives = 65/86 (75%)
Frame = +2
Query: 2 DIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFDVQ 181
++R +CL RLFEDP+F A D SL++ + + + WLRPGEI+ PQL EG+SRFDV
Sbjct: 284 ELRDQCLESKRLFEDPQFLANDSSLFFSKRPPKRVEWLRPGEITREPQLITEGHSRFDVI 343
Query: 182 QGELGDCWLLAAVANLTLHRKLFFQL 259
QGELGDCWLLAA ANLTL +LF+++
Sbjct: 344 QGELGDCWLLAAAANLTLKDELFYRV 369
Score = 55.6 bits (128), Expect = 9e-09
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +1
Query: 226 LDTSSQVILPVVPDDQSFXEDYAGVFHFRFWLYGRWV 336
L ++ VVP DQSF E+YAG+FHF+FW YG+WV
Sbjct: 359 LTLKDELFYRVVPPDQSFTENYAGIFHFQFWQYGKWV 395
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 113 bits (272), Expect = 3e-26
Identities = 50/86 (58%), Positives = 65/86 (75%)
Frame = +2
Query: 2 DIRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFDVQ 181
++R +CL RLFEDP+F A D SL++ + + + WLRPGEI+ PQL EG+SRFDV
Sbjct: 305 ELRDQCLESKRLFEDPQFLANDSSLFFSKRPPKRVEWLRPGEITREPQLITEGHSRFDVI 364
Query: 182 QGELGDCWLLAAVANLTLHRKLFFQL 259
QGELGDCWLLAA ANLTL +LF+++
Sbjct: 365 QGELGDCWLLAAAANLTLKDELFYRV 390
Score = 55.6 bits (128), Expect = 9e-09
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +1
Query: 226 LDTSSQVILPVVPDDQSFXEDYAGVFHFRFWLYGRWV 336
L ++ VVP DQSF E+YAG+FHF+FW YG+WV
Sbjct: 380 LTLKDELFYRVVPPDQSFTENYAGIFHFQFWQYGKWV 416
>AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain family
protein 4, isoform b protein.
Length = 603
Score = 108 bits (260), Expect = 9e-25
Identities = 49/84 (58%), Positives = 59/84 (70%)
Frame = +2
Query: 8 RSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQG 187
R +CL LFEDPEFPA SLYY+ I W RPGEI NPQL +G SRFDV+QG
Sbjct: 231 REKCLRNKTLFEDPEFPATAASLYYRTPPRDRIIWKRPGEIIANPQLITQGESRFDVKQG 290
Query: 188 ELGDCWLLAAVANLTLHRKLFFQL 259
LGDCW LAA+AN+TL+ LF+++
Sbjct: 291 ALGDCWFLAALANITLYDALFYRI 314
Score = 52.0 bits (119), Expect = 1e-07
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 256 VVPDDQSFXEDYAGVFHFRFWLYGRWV 336
+VP +QSF E+YAG+FHF+FW YG+WV
Sbjct: 314 IVPPNQSFTENYAGIFHFQFWHYGKWV 340
>AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain family
protein 4, isoform a protein.
Length = 716
Score = 108 bits (260), Expect = 9e-25
Identities = 49/84 (58%), Positives = 59/84 (70%)
Frame = +2
Query: 8 RSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQG 187
R +CL LFEDPEFPA SLYY+ I W RPGEI NPQL +G SRFDV+QG
Sbjct: 231 REKCLRNKTLFEDPEFPATAASLYYRTPPRDRIIWKRPGEIIANPQLITQGESRFDVKQG 290
Query: 188 ELGDCWLLAAVANLTLHRKLFFQL 259
LGDCW LAA+AN+TL+ LF+++
Sbjct: 291 ALGDCWFLAALANITLYDALFYRI 314
Score = 52.0 bits (119), Expect = 1e-07
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 256 VVPDDQSFXEDYAGVFHFRFWLYGRWV 336
+VP +QSF E+YAG+FHF+FW YG+WV
Sbjct: 314 IVPPNQSFTENYAGIFHFQFWHYGKWV 340
>AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain family
protein 6 protein.
Length = 790
Score = 103 bits (248), Expect = 2e-23
Identities = 46/84 (54%), Positives = 59/84 (70%)
Frame = +2
Query: 8 RSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQG 187
R +CL E RLFEDP+FPA + S+YYK+ I WLRP +I NP+L V G SRFDV+QG
Sbjct: 148 RQKCLDENRLFEDPQFPANNSSIYYKKPPKSHIVWLRPAKIFANPRLIVNGKSRFDVRQG 207
Query: 188 ELGDCWLLAAVANLTLHRKLFFQL 259
LG+CW LAA A L +LF+++
Sbjct: 208 SLGNCWFLAAAATLAQRDELFYRV 231
Score = 54.0 bits (124), Expect = 3e-08
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +1
Query: 256 VVPDDQSFXEDYAGVFHFRFWLYGRWV 336
VVP DQSF E+YAG+FHF+FW YG WV
Sbjct: 231 VVPPDQSFTENYAGIFHFQFWRYGEWV 257
>AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical
protein Y47H10A.1 protein.
Length = 702
Score = 81.8 bits (193), Expect = 1e-16
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +2
Query: 8 RSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQG 187
R +CL E RLFEDP+FPA + S+Y K I W RPGE+ NP+L + FDV+ G
Sbjct: 206 RQKCLDEKRLFEDPQFPANNSSIYVKVRPKDHIVWKRPGELFANPRLIGSDKTHFDVKLG 265
Query: 188 ELGDCWLLAAVANLTLHRKLFFQL 259
L + W L+ ANL+L +LF+++
Sbjct: 266 RLENRWFLSGAANLSLRDELFYRV 289
Score = 54.0 bits (124), Expect = 3e-08
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +1
Query: 226 LDTSSQVILPVVPDDQSFXEDYAGVFHFRFWLYGRWV 336
L ++ VVP DQSF E YAG+FHF+FW YG WV
Sbjct: 279 LSLRDELFYRVVPPDQSFTEKYAGIFHFQFWRYGEWV 315
>Z82277-1|CAB05248.1| 648|Caenorhabditis elegans Hypothetical
protein LLC1.1 protein.
Length = 648
Score = 74.1 bits (174), Expect = 2e-14
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +2
Query: 5 IRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQ 184
+R C+ + + F D FP ++SL+ ++ I W RPGE+ +P LFVEG S DV Q
Sbjct: 18 LRKICIKKKQPFVDTLFPPTNQSLFLEQRQSSDIVWKRPGELHPDPHLFVEGASPNDVTQ 77
Query: 185 GELGDCWLLAAVANLTLHRKLFFQL 259
G LG+CW ++A + LT + KL Q+
Sbjct: 78 GILGNCWFVSACSALTHNFKLLAQV 102
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +1
Query: 241 QVILPVVPD--DQ--SFXEDYAGVFHFRFWLYGRWV 336
+++ V+PD DQ S YAG+F FRFW +G+WV
Sbjct: 97 KLLAQVIPDADDQEWSTKHAYAGIFRFRFWRFGKWV 132
>U12921-1|AAB60256.1| 648|Caenorhabditis elegans sex determination
protein.
Length = 648
Score = 74.1 bits (174), Expect = 2e-14
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +2
Query: 5 IRSRCLAEGRLFEDPEFPAVDRSLYYKESLDRPITWLRPGEISDNPQLFVEGYSRFDVQQ 184
+R C+ + + F D FP ++SL+ ++ I W RPGE+ +P LFVEG S DV Q
Sbjct: 18 LRKICIKKKQPFVDTLFPPTNQSLFLEQRQSSDIVWKRPGELHPDPHLFVEGASPNDVTQ 77
Query: 185 GELGDCWLLAAVANLTLHRKLFFQL 259
G LG+CW ++A + LT + KL Q+
Sbjct: 78 GILGNCWFVSACSALTHNFKLLAQV 102
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +1
Query: 241 QVILPVVPD--DQ--SFXEDYAGVFHFRFWLYGRWV 336
+++ V+PD DQ S YAG+F FRFW +G+WV
Sbjct: 97 KLLAQVIPDADDQEWSTKHAYAGIFRFRFWRFGKWV 132
>AF040660-1|AAC71148.1| 634|Caenorhabditis elegans Hypothetical
protein W05G11.4 protein.
Length = 634
Score = 35.9 bits (79), Expect = 0.007
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +2
Query: 53 FPAVDRSLYYKESLDRPITWLRPGEI--SDNPQLFVEGYSR---FDVQQGEL-GDCWLLA 214
FP+ + S+ + WLRP +I D ++ D++QG L GDCWLL+
Sbjct: 98 FPSTTNGVQCNNSIIDSLHWLRPSQIRTKDGTSCAWSVFNNPQPSDIEQGNLVGDCWLLS 157
Query: 215 AVA 223
A+A
Sbjct: 158 AMA 160
>Z73971-12|CAC42267.1| 718|Caenorhabditis elegans Hypothetical
protein T11A5.6 protein.
Length = 718
Score = 32.3 bits (70), Expect = 0.091
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Frame = +2
Query: 104 ITWLRPGEI-----SDNPQLFVEGYSRFDVQQGEL-GDCWLLAAVA 223
+ WLRP ++ +P + D++QG L GDCWL++A+A
Sbjct: 168 LNWLRPSQMFTKDGRSSPWSVLNNPRPSDIEQGTLVGDCWLMSAMA 213
>Z72515-6|CAA96686.2| 718|Caenorhabditis elegans Hypothetical
protein T11A5.6 protein.
Length = 718
Score = 32.3 bits (70), Expect = 0.091
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Frame = +2
Query: 104 ITWLRPGEI-----SDNPQLFVEGYSRFDVQQGEL-GDCWLLAAVA 223
+ WLRP ++ +P + D++QG L GDCWL++A+A
Sbjct: 168 LNWLRPSQMFTKDGRSSPWSVLNNPRPSDIEQGTLVGDCWLMSAMA 213
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = -1
Query: 257 TGRITCDEVSSW---QRQPTANNRPTLLVGRRSDCSLRRTVE 141
T R T + ++SW RQ + +N +L+G +SD RR V+
Sbjct: 89 TRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEARREVK 130
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = -1
Query: 236 EVSSWQRQPTANNRPTLLVGRRSDCSLRRTVEGCR*FPQV*AK*WACPGSPCSRGCGPRP 57
+V+S+ R + P L + C+ C PQ PG P SRG RP
Sbjct: 105 QVNSYARVNSYATAPVLQHPTQQQCNCAPQANNCPPGPQGPTGYPGAPGEPGSRGLDGRP 164
Query: 56 ETRGL 42
G+
Sbjct: 165 GANGV 169
>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
protein Y47D3B.7 protein.
Length = 1113
Score = 26.6 bits (56), Expect = 4.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 146 LFVEGYSRFDVQQGELGDCWLL 211
L+ E Y+ + + G GDCW L
Sbjct: 1030 LYQEAYNHYAIINGTRGDCWRL 1051
>U80023-4|AAG24038.1| 318|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 25 protein.
Length = 318
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 206 LLAAVANLTLHRKLFFQLYLMIRVSMKIMRASSISVSGYTG 328
LL +V +L F +YL ++ S KIMR+ S+ ++ TG
Sbjct: 5 LLHSVLSLVGILSNAFMMYLALKKSPKIMRSYSVVITIKTG 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,762,914
Number of Sequences: 27780
Number of extensions: 144966
Number of successful extensions: 668
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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