Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20837
         (338 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    27   0.062
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   3.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   3.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   4.1  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   4.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   4.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   5.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   5.4  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 27.1 bits (57), Expect = 0.062
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 111 GSDLGKSATTLNCSSKATVASTSNKESWAI 200
           G  LG+ A   NC   AT+ + ++ + WAI
Sbjct: 162 GKVLGELAILYNCKRTATITAATDCQLWAI 191


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 104 ITWLRPGEISDNP 142
           +TWL+ G+I  NP
Sbjct: 839 VTWLKGGKIELNP 851


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 104 ITWLRPGEISDNP 142
           +TWL+ G+I  NP
Sbjct: 835 VTWLKGGKIELNP 847


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 129 SATTLNCSSKATVASTSNKESWAIVGC 209
           S T LNC ++   +    K+  A +GC
Sbjct: 235 SGTALNCWTQTENSLEKAKQVGAFMGC 261


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 129 SATTLNCSSKATVASTSNKESWAIVGC 209
           S T LNC ++   +    K+  A +GC
Sbjct: 106 SGTALNCWTQTENSLEKAKQVGAFMGC 132


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 129 SATTLNCSSKATVASTSNKESWAIVGC 209
           S T LNC ++   +    K+  A +GC
Sbjct: 235 SGTALNCWTQTENSLEKAKQVGAFMGC 261


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 247 ILPVVPDDQSFXEDYAGVFHF 309
           I  VVP D+S   D A  F++
Sbjct: 623 IKSVVPSDESHWNDLAMEFYY 643


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 247 ILPVVPDDQSFXEDYAGVFHF 309
           I  VVP D+S   D A  F++
Sbjct: 661 IKSVVPSDESHWNDLAMEFYY 681


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,604
Number of Sequences: 438
Number of extensions: 2000
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7715466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)