Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20836
         (513 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    27   0.37 
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           25   1.5  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   1.5  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   2.0  
AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    24   2.6  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   6.1  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           23   6.1  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           23   6.1  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           23   6.1  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           23   6.1  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   8.0  

>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 27.1 bits (57), Expect = 0.37
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 360  DVLHVGRGQVPSSGGNGGQPDGQRKED 440
            D++  G G     GG GG+ DG  KE+
Sbjct: 1706 DIIVSGSGGGGGGGGGGGEEDGSDKEE 1732



 Score = 23.8 bits (49), Expect = 3.5
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +3

Query: 345  VHQQEDVLHVGRGQVPSSGGNGGQPDGQRKEDG 443
            +H  ED   V    V  SGG GG   G  +EDG
Sbjct: 1696 IHDSEDEKDVDI-IVSGSGGGGGGGGGGGEEDG 1727


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -1

Query: 165 VEPISTNMSTMPDSLRNLASTRFFCPPVTRLTSDETTFPSP 43
           V P +T  S +P       +T  +  P T  T+D TT   P
Sbjct: 233 VPPTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPP 273



 Score = 23.0 bits (47), Expect = 6.1
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = -1

Query: 204 PVSAVYCRNASPGVEPISTNMSTMPDSLRNLASTRFFCPPVTRLTSDETTFPSP*LTTS 28
           PV+A  C + SPG +  +T   T         +T  +    T   +  TTFP+   TTS
Sbjct: 83  PVNAK-CESQSPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTT-TTTS 139


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 33  WSTTGKGTWSRR 68
           WSTT  G+W+RR
Sbjct: 863 WSTTTSGSWTRR 874


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -3

Query: 178 RVPGGGAHQHEHVHDA 131
           R  GGG H H H H A
Sbjct: 426 RSGGGGRHHHHHHHSA 441


>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 206 SR*ARCTAGTRP-RGWSPSARTCPRCRTRSGTLHRR 102
           S+ A+ T  T P +G   S  TC  C+T + TL RR
Sbjct: 39  SQKAKQTVKTPPAQGNRRSGVTCANCQTTTTTLWRR 74


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 378 RGQVPSSGGNGGQPDGQRKEDGCH 449
           RG+  + GGN G   G R E  C+
Sbjct: 402 RGRAGTVGGNRGAGGGWRSERTCN 425


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = -1

Query: 204 PVSAVYCRNASPGVEPISTNMSTMPDSLRNLASTRFFCPPVTRLTSDETTFPSP*LTTS 28
           PV+A  C + SPG +  +T   T         +T  +    T   +  TTFP+   TTS
Sbjct: 83  PVNAK-CESQSPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTT-TTTS 139


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = -1

Query: 204 PVSAVYCRNASPGVEPISTNMSTMPDSLRNLASTRFFCPPVTRLTSDETTFPSP*LTTS 28
           PV+A  C + SPG +  +T   T         +T  +    T   +  TTFP+   TTS
Sbjct: 83  PVNAK-CESQSPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTT-TTTS 139


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = -1

Query: 204 PVSAVYCRNASPGVEPISTNMSTMPDSLRNLASTRFFCPPVTRLTSDETTFPSP*LTTS 28
           PV+A  C + SPG +  +T   T         +T  +    T   +  TTFP+   TTS
Sbjct: 83  PVNAK-CESQSPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTT-TTTS 139


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = -1

Query: 204 PVSAVYCRNASPGVEPISTNMSTMPDSLRNLASTRFFCPPVTRLTSDETTFPSP*LTTS 28
           PV+A  C + SPG +  +T   T         +T  +    T   +  TTFP+   TTS
Sbjct: 83  PVNAK-CESQSPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTT-TTTS 139


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 375 GRGQVPSSGGNGGQPDGQRKEDG 443
           GRG     GG GG   G R  DG
Sbjct: 84  GRGGRDGGGGFGGGGYGDRNGDG 106


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,030
Number of Sequences: 2352
Number of extensions: 13081
Number of successful extensions: 54
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)