Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20835
         (348 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   1.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   2.5  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   2.5  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   3.2  
AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           23   4.3  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           23   4.3  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           23   4.3  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           23   4.3  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    22   7.5  
AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.      21   9.9  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 16  SIVLQILFLISINCTVIINSYPENECNLD--NKLVDEIQSYKNVTKQIIDKIVSGGFGT 186
           SI+ +IL + +   + +     +  CN +  NKL+ EI + +++ K   D   +GG  T
Sbjct: 628 SIIQEILNIPTTIASDVAFDSSDFPCNSEEFNKLIQEIGNQQDLVKLETDAETAGGGAT 686


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 194 YIFVPNPPDTILSIICFVTFLYDCISSTNLLSK 96
           Y+ V   P  + S I  +  L+DCISS  L  K
Sbjct: 184 YVMVVYIPPQLSSEISTLRSLHDCISSFTLRLK 216


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 176 PPDTILSIICFVTFLYDCISSTNLL 102
           PP+ I +++  V   + CI  TN+L
Sbjct: 47  PPELIDAVLSNVDLHWSCIGCTNML 71


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 254 RALLPAKRAPNVSMDLE*SSYIFVPNPPD 168
           RAL  AK+ P  S+D++  + + V   P+
Sbjct: 586 RALRSAKKEPAESLDMDGINLVMVTGEPE 614


>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 152 LLIKSCQEDLERRCMKIILSP*IHXE 229
           +L++SC+E+  +R  K  + P  H E
Sbjct: 135 VLVRSCKEEPSKRTGKYWIKPTEHDE 160


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 152 LLIKSCQEDLERRCMKIILSP*IHXE 229
           +L++SC+E+  +R  K  + P  H E
Sbjct: 135 VLVRSCKEEPSKRTGKYWIKPTEHDE 160


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 152 LLIKSCQEDLERRCMKIILSP*IHXE 229
           +L++SC+E+  +R  K  + P  H E
Sbjct: 135 VLVRSCKEEPSKRTGKYWIKPTEHDE 160


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 152 LLIKSCQEDLERRCMKIILSP*IHXE 229
           +L++SC+E+  +R  K  + P  H E
Sbjct: 135 VLVRSCKEEPSKRTGKYWIKPTEHDE 160


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
 Frame = -3

Query: 121 FHQPTYC-LNYIHSPDN 74
           +HQ  +  L YIH PDN
Sbjct: 364 YHQNGHVMLGYIHDPDN 380


>AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.
          Length = 110

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 104 ISWLMKYNHTKMLQ 145
           IS+L KY HT ++Q
Sbjct: 53  ISFLPKYEHTHVMQ 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 358,092
Number of Sequences: 2352
Number of extensions: 6299
Number of successful extensions: 25
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)