Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20834
         (771 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013949-1|AAH13949.1|  223|Homo sapiens coiled-coil domain cont...    75   4e-13
AB037798-1|BAA92615.1|  988|Homo sapiens KIAA1377 protein protein.     31   6.0  

>BC013949-1|AAH13949.1|  223|Homo sapiens coiled-coil domain
           containing 124 protein.
          Length = 223

 Score = 74.5 bits (175), Expect = 4e-13
 Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = +1

Query: 505 SKTVDEALAILSDKPEV-DRHPEKRLKAAFTAFEQINLPRLKAGNPXXXXXXXXXXXXXX 681
           ++T+++A+A+LS   E  DRHPE+R++AAFTAFE+  LPRLK  NP              
Sbjct: 144 ARTIEDAIAVLSVAEEAADRHPERRMRAAFTAFEEAQLPRLKQENPNMRLSQLKQLLKKE 203

Query: 682 WHKSPQNPLNQR 717
           W +SP NP+NQR
Sbjct: 204 WLRSPDNPMNQR 215



 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 24/43 (55%), Positives = 31/43 (72%)
 Frame = +3

Query: 90  MPKKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWEDND 218
           MPKKF GEN+K+ AAR R+  AK   D K +K +EDA W+D+D
Sbjct: 1   MPKKFQGENTKSAAARARRAEAKAAADAKKQKELEDAYWKDDD 43


>AB037798-1|BAA92615.1|  988|Homo sapiens KIAA1377 protein protein.
          Length = 988

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
 Frame = +2

Query: 458 PPLEENLNRIQLDGELARLLMKLSRYSVISRK*ID------ILKNDLKQPSQPLNKSICH 619
           PPLEE L +IQ     + + +  SR   I+ + ID      + KND K   Q L+K  C 
Sbjct: 9   PPLEEALKQIQESNLKSEVNLPFSRRPTINWRAIDSALPSALSKNDHKHQKQLLSKINCE 68

Query: 620 VLKPGTLRSGFSAQRN 667
                 +R+  +  +N
Sbjct: 69  KEMNENMRATLATSKN 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,242,951
Number of Sequences: 237096
Number of extensions: 1337927
Number of successful extensions: 3993
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3977
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)