Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20831
         (618 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL833400-1|CAD38637.1|  930|Homo sapiens hypothetical protein pr...    36   0.11 
AB095948-1|BAC23124.1| 1449|Homo sapiens KIAA2028 protein protein.     36   0.11 
BC146787-1|AAI46788.1| 1364|Homo sapiens pleckstrin homology dom...    29   9.9  
AB033026-1|BAA86514.1| 1403|Homo sapiens KIAA1200 protein protein.     29   9.9  

>AL833400-1|CAD38637.1|  930|Homo sapiens hypothetical protein
           protein.
          Length = 930

 Score = 35.9 bits (79), Expect = 0.11
 Identities = 14/57 (24%), Positives = 29/57 (50%)
 Frame = -2

Query: 482 IISFFI*NKYNHIMKFXLKLMFMNNMATAIDFEIKNKKNDFLN*IQSTVNLNRPIKT 312
           I+S  + N Y+H + F + + FMN +   + F+      +FLN +     + +P ++
Sbjct: 543 ILSTLLRNPYHHSLPFSIPVHFMNGIYQVVGFDASTTVEEFLNTLNQDTGMRKPAQS 599


>AB095948-1|BAC23124.1| 1449|Homo sapiens KIAA2028 protein protein.
          Length = 1449

 Score = 35.9 bits (79), Expect = 0.11
 Identities = 14/57 (24%), Positives = 29/57 (50%)
 Frame = -2

Query: 482  IISFFI*NKYNHIMKFXLKLMFMNNMATAIDFEIKNKKNDFLN*IQSTVNLNRPIKT 312
            I+S  + N Y+H + F + + FMN +   + F+      +FLN +     + +P ++
Sbjct: 1062 ILSTLLRNPYHHSLPFSIPVHFMNGIYQVVGFDASTTVEEFLNTLNQDTGMRKPAQS 1118


>BC146787-1|AAI46788.1| 1364|Homo sapiens pleckstrin homology domain
            containing, family H (with MyTH4 domain) member 1
            protein.
          Length = 1364

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 10/54 (18%), Positives = 27/54 (50%)
 Frame = -2

Query: 482  IISFFI*NKYNHIMKFXLKLMFMNNMATAIDFEIKNKKNDFLN*IQSTVNLNRP 321
            ++S  + N ++H + F + + F N     + F+  +  ++FL  +   + + +P
Sbjct: 982  VVSILLRNPFHHSLPFSIPVHFTNGTYHVVGFDGSSTVDEFLQRLNQEIGMRKP 1035


>AB033026-1|BAA86514.1| 1403|Homo sapiens KIAA1200 protein protein.
          Length = 1403

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 10/54 (18%), Positives = 27/54 (50%)
 Frame = -2

Query: 482  IISFFI*NKYNHIMKFXLKLMFMNNMATAIDFEIKNKKNDFLN*IQSTVNLNRP 321
            ++S  + N ++H + F + + F N     + F+  +  ++FL  +   + + +P
Sbjct: 1021 VVSILLRNPFHHSLPFSIPVHFTNGTYHVVGFDGSSTVDEFLQRLNQEIGMRKP 1074


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,996,585
Number of Sequences: 237096
Number of extensions: 1431261
Number of successful extensions: 1517
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1517
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)