Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20826
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7S9T3 Cluster: Predicted protein; n=1; Neurospora cras...    34   2.9  
UniRef50_UPI00006CFBB4 Cluster: Protein kinase domain containing...    33   3.9  
UniRef50_UPI00006CB33E Cluster: hypothetical protein TTHERM_0045...    33   6.7  
UniRef50_Q4P5V4 Cluster: Putative uncharacterized protein; n=1; ...    32   8.9  

>UniRef50_Q7S9T3 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 805

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
 Frame = +3

Query: 438 HSSLLSNAQYSTQAINRNSHY----SNSNSVIRIIEI-SHRASPSQSQHISDLQAQMA 596
           HS LL+++     A+N   H+    S+S+S + I ++ S+ +SPS+SQH +D    ++
Sbjct: 400 HSPLLNSSSVKCFAVNPEYHHERSWSSSSSTVSISDMRSNPSSPSRSQHTADTSVNLS 457


>UniRef50_UPI00006CFBB4 Cluster: Protein kinase domain containing
           protein; n=1; Tetrahymena thermophila SB210|Rep: Protein
           kinase domain containing protein - Tetrahymena
           thermophila SB210
          Length = 1446

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +3

Query: 423 VLDNAHSSLLSNAQYSTQAINRNSHYSNSNSVIRIIEISHRASPSQSQHISDLQAQ 590
           VL+N+ S    +  + T   N N++ +N NS +   E S++  PSQ  + S LQ Q
Sbjct: 617 VLNNSISMNYFDKNFMTPNNNNNNNQNNPNSYLSSAEGSNKNQPSQQLNYSTLQQQ 672


>UniRef50_UPI00006CB33E Cluster: hypothetical protein
           TTHERM_00459250; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00459250 - Tetrahymena
           thermophila SB210
          Length = 738

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
 Frame = +3

Query: 420 NVLDNAHSSLLSNA----QYSTQAINRNSHYSNSNSVIRIIEISHRASPSQS 563
           N+L N   + LSNA    QY  QA+N+NS   N+N    +I  S+  S SQS
Sbjct: 231 NILGNLGQNQLSNANLSQQYQIQALNKNSIAKNNNQSYSLINNSYTNS-SQS 281


>UniRef50_Q4P5V4 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 681

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +1

Query: 271 GAISQVEGEL--GEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTS 426
           GA +   G L     G+ T T S  T A+SAG +GS N + S   G  F  G++
Sbjct: 35  GASTTTGGSLFGSPAGTGTNTASNSTPASSAGLFGSSNTNSSTSGGSGFSFGSA 88


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,370,943
Number of Sequences: 1657284
Number of extensions: 10704554
Number of successful extensions: 29570
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29508
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)