Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20821
(554 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12498| Best HMM Match : TPR_1 (HMM E-Value=0) 31 0.63
SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0) 31 0.84
SB_14077| Best HMM Match : TPR_1 (HMM E-Value=0) 31 0.84
SB_54160| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_21272| Best HMM Match : LEA_4 (HMM E-Value=1.1) 29 1.9
SB_21748| Best HMM Match : TPR_1 (HMM E-Value=0) 29 2.6
SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22) 29 2.6
SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.6
SB_20347| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-20) 29 3.4
SB_51942| Best HMM Match : 7tm_1 (HMM E-Value=0.059) 28 4.5
SB_9194| Best HMM Match : SWIM (HMM E-Value=0.01) 28 4.5
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_38427| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_31967| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-39) 27 7.8
SB_9581| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0019) 27 7.8
SB_11762| Best HMM Match : 4HBT (HMM E-Value=1.6e-19) 27 7.8
>SB_12498| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 495
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 21 RKSIGNLSERGEYISNSTQSTDRKSISSMHRSTRDNIGVISQ 146
+KS+GN E +Y + Q +R S R NIGV+ Q
Sbjct: 151 QKSLGNYEEAMKYYQQALQVFERTGNESGQADVRHNIGVVQQ 192
Score = 28.7 bits (61), Expect = 3.4
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Frame = +3
Query: 21 RKSIGNLSERGEYISNSTQSTDRKSISSMHRSTRDNIGVI----SQHSESDSHRHQ---- 176
++S+GN E +Y + Q +R S R NIGV+ + E+ + Q
Sbjct: 71 QQSLGNYEEAMKYYQQALQVFERTGNESKQAKVRHNIGVVQDSLGNYEEAMKYYQQALQV 130
Query: 177 IKRDGQSTMTVD-RQPKAVVRDNL 245
+R G + VD RQ VV+ +L
Sbjct: 131 FERTGNESDQVDVRQNIGVVQKSL 154
>SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 693
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 21 RKSIGNLSERGEYISNSTQSTDRKSISSMHRSTRDNIGVISQ 146
++S+GN E +Y + Q +R S + R NIGV+ Q
Sbjct: 622 QQSLGNYEEAMKYYQQALQVYERTGNESKQANVRHNIGVVQQ 663
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 21 RKSIGNLSERGEYISNSTQSTDRKSISSMHRSTRDNIGVISQ 146
+K +GN E +Y + Q +R S + R NIGV+ Q
Sbjct: 382 QKCLGNYEEAMKYYQQALQVFERTGNESKQATVRHNIGVVQQ 423
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 21 RKSIGNLSERGEYISNSTQSTDRKSISSMHRSTRDNIGVISQ 146
++ +GN E +Y + Q +R S R NIGV+ Q
Sbjct: 582 QRRLGNYEEAMKYYQQALQVFERTGNESKQADVRHNIGVVQQ 623
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 21 RKSIGNLSERGEYISNSTQSTDRKSISSMHRSTRDNIGVISQ 146
++ +GN E +Y + Q +R S R NIGV+ Q
Sbjct: 222 QQRLGNYEEAMKYYQQALQVFERTGNESDQAGVRQNIGVVQQ 263
>SB_14077| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 357
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 21 RKSIGNLSERGEYISNSTQSTDRKSISSMHRSTRDNIGVISQ 146
++S+GN E +Y + Q +R S + R NIGV+ Q
Sbjct: 262 QQSLGNYEEAMKYYQQALQVYERTGNESKQANVRHNIGVVQQ 303
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 21 RKSIGNLSERGEYISNSTQSTDRKSISSMHRSTRDNIGVISQ 146
++S+GN E +Y + Q +R S + R NIGV+ Q
Sbjct: 302 QQSLGNYEEAMKYYQQALQVFERTGNESKQANVRHNIGVVQQ 343
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 21 RKSIGNLSERGEYISNSTQSTDRKSISSMHRSTRDNIGVISQ 146
++ +GN E +Y + Q +R S R NIGV+ Q
Sbjct: 222 QQRLGNYEEAMKYYQQALQVFERTGNESKQAGVRHNIGVVQQ 263
>SB_54160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 21 RKSIGNLSERGEYISNSTQSTDRKSISSMHRSTRDNIGVISQ 146
++S+GN E +Y + Q +R S R+NIGV+ Q
Sbjct: 142 QQSLGNYEEAMKYYQQALQVFERTGNESDQADVRNNIGVVQQ 183
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 21 RKSIGNLSERGEYISNSTQSTDRKSISSMHRSTRDNIGVISQ 146
++S+GN E +Y + Q +R S R NIGV+ Q
Sbjct: 102 QQSLGNYEEAMKYYQQALQVFERTGNESDQAGVRQNIGVVQQ 143
>SB_21272| Best HMM Match : LEA_4 (HMM E-Value=1.1)
Length = 160
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +3
Query: 189 GQSTMTVDRQPKAVVRDNLRIGESFMVSQKRVTVASLDLNKHKELIGQNASS 344
GQ +VD V + +GE ++++VT ++ K +++GQN S
Sbjct: 9 GQHVQSVDENVGVVGQHVQSVGEKVQDAEQKVTKGFQEVGKEFQVVGQNVQS 60
>SB_21748| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 373
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +3
Query: 21 RKSIGNLSERGEYISNSTQSTDRKSISSMHRSTRDNIGVISQ----HSESDSHRHQIKRD 188
++ +GN E +Y + Q +R S + R NIGV+ + + E+ + Q +
Sbjct: 102 QRRLGNYEEAMKYYQQALQVYERTGNESKQANVRQNIGVVQESLGNYEEAMKYYQQALQV 161
Query: 189 GQSTMTVDRQPKAVVRDNLRI 251
+ T + Q A+VR N+ +
Sbjct: 162 FERTGNENNQ--AIVRRNIGV 180
>SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)
Length = 2269
Score = 29.1 bits (62), Expect = 2.6
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = -2
Query: 190 PSLLI*WRWESLSECCEITPMLSRV 116
P +L+ WRW++++ C +I M ++V
Sbjct: 976 PDILLTWRWDNVAYCDDIRKMFNQV 1000
>SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1449
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 424 IHSTCARCVSSYPDRVSTHRHTSIHET 504
+H TC RC S+ DR H + H T
Sbjct: 1180 LHLTCFRCGESFSDRDEYRSHLTTHRT 1206
>SB_20347| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-20)
Length = 1074
Score = 28.7 bits (61), Expect = 3.4
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Frame = +3
Query: 192 QSTMTVDRQPKA-VVRDNLRIGESFMVSQKRVTVASLDLNKHKELIGQNASSE*KESLVM 368
Q T +D KA ++R R+G S + + R+ + ++ EL+ + S+ S V
Sbjct: 623 QVTKQLDLVEKAGILRCRGRLGNSELATDARMPIILPRDHRLTELVILDCHSKLHHSGVS 682
Query: 369 AITH--RILYWVTVTQVIRKNTQHMCTVCVQLP*SSLHAPP 485
R +WV + + K H C C +L +APP
Sbjct: 683 GTLAQLRTRFWVPKGRQVVKKIVHRCVTCKKLE-GRAYAPP 722
>SB_51942| Best HMM Match : 7tm_1 (HMM E-Value=0.059)
Length = 408
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 24 KSIGNLS-ERGEYISNSTQSTDRKSISSMHRSTRDNIGVISQHSESDSHRHQIKRDGQ 194
KS G +S E+ S+ S+D S + +RD IGV+ + E + ++ DG+
Sbjct: 341 KSDGKVSREQPNIESDGKNSSDNLKTESARKMSRDQIGVV--NDEKSREQQNVESDGK 396
>SB_9194| Best HMM Match : SWIM (HMM E-Value=0.01)
Length = 701
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 172 WRWESLSECCEITPMLSRVERCM 104
W WE LS C P+LS E C+
Sbjct: 486 WGWERLSPLCTQNPLLSLDELCI 508
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 63 SNSTQSTDRKSISSMHRSTRDNIGVISQHSESDSHRHQIKRDGQST 200
SN+T+S ++S ++ R T + +H+ S + + +DGQ T
Sbjct: 551 SNTTRSHTKRSSNTTRRHTGRSSNTTRRHTRRSSKQLAVTQDGQVT 596
>SB_56912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +3
Query: 30 IGNLSERGEYISNSTQSTDRKSISSMHRSTRDNIGVISQHSESDSHRHQIKRDGQSTMT 206
+ NL E E I + R + + + N G + H+E+ + +KRDG +T
Sbjct: 288 LNNLQEGSEIIGDEDLGKTRSETENKNEDSEAN-GDENGHNEASEEKPALKRDGTMAVT 345
>SB_38427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = +3
Query: 21 RKSIGNLSERGEYISNSTQSTDRKSISSMHRSTRDNIGVISQHSESDSHRHQIKRDGQST 200
++ +GN E +Y + Q +R S R +IGV+ ++ ++ +K Q+
Sbjct: 240 QRRLGNYEEAMKYYQQALQVYERTGNESKQAGVRQDIGVVQEY--LGNYEEAMKYYQQAL 297
Query: 201 MTVDR----QPKAVVRDNLRI 251
+R +A+VR N+ +
Sbjct: 298 QVFERTGNENDQAIVRHNIGV 318
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 150 SVAKSRLCCPAWNDAWN*CFFCQCSELNCLYILHVRIDC 34
SV R+ CP W + C C C+ +L VR+ C
Sbjct: 80 SVLHVRVACPCWVSVLHVRVVCPC----CMSLLRVRVAC 114
>SB_31967| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-39)
Length = 409
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 469 LDQGSWTHTVHMCCVFFLITCVTV 398
L G WTH+ H+C V+ VTV
Sbjct: 79 LTNGKWTHSHHLCNVWTTAYLVTV 102
>SB_9581| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0019)
Length = 573
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +2
Query: 290 SFSRSEQTQRTDRSXXXXXXXXXARHGHNTSHFVLGDGNTSYKKEYTAHVHGVC 451
S + + + +RTDR R+G+N H+ L Y Y +H C
Sbjct: 242 SAAMAAKKKRTDRKDGRHLSHLSTRNGYNIKHYQL-----QYSPSYNGTIHDTC 290
>SB_11762| Best HMM Match : 4HBT (HMM E-Value=1.6e-19)
Length = 519
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 75 QSTDRKSISSMHRSTRDNIGVISQHSESDSHRHQIKRDGQS 197
+S+D S SS R D + ++S+ + SDS H I GQS
Sbjct: 459 KSSDSSSESSS-RKPNDMVVLVSRRAPSDSKDHYIMLTGQS 498
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,826,698
Number of Sequences: 59808
Number of extensions: 381086
Number of successful extensions: 1078
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1288581898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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