Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20821
         (554 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    30   0.059
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   1.3  
Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    25   1.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   1.7  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   2.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   8.9  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   8.9  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   8.9  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 29.9 bits (64), Expect = 0.059
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 436 CARCVSSYPDRVSTHRHTSIHE 501
           C RC S++PDR S   H   HE
Sbjct: 329 CKRCDSTFPDRYSYKMHAKTHE 350



 Score = 23.4 bits (48), Expect = 5.1
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 436 CARCVSSYPDRVSTHRHTSIH 498
           C  C  + PD+    RH  IH
Sbjct: 242 CPHCTYASPDKFKLTRHMRIH 262


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 240 NLRIGESFMVSQKRVTV 290
           NLR+GE+F  SQ  +TV
Sbjct: 322 NLRVGETFHASQPSITV 338


>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 20/79 (25%), Positives = 29/79 (36%)
 Frame = +3

Query: 225 AVVRDNLRIGESFMVSQKRVTVASLDLNKHKELIGQNASSE*KESLVMAITHRILYWVTV 404
           AV      IG   + S  R     +D  K    I      +  ESL+ A +    YW+  
Sbjct: 69  AVKNKKFTIGTLGVGSFFRAWRNCIDEGKGLATIESEKEQKYLESLLKASSTGSNYWIGA 128

Query: 405 TQVIRKNTQHMCTVCVQLP 461
           T +   NT  +  +   LP
Sbjct: 129 TNIGASNTNKLTWITTDLP 147


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 14/54 (25%), Positives = 22/54 (40%)
 Frame = +3

Query: 372  ITHRILYWVTVTQVIRKNTQHMCTVCVQLP*SSLHAPPYKHTRDSRNISSTHKE 533
            + H +  W TV Q + +  Q    VC   P   L    +KH  +S ++     E
Sbjct: 1595 LAHNVRMWRTVRQFLERTRQKRMAVCP--PSVVLAREAFKHPSESFSLEDPISE 1646


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 372  ITHRILYWVTVTQVIRKNTQHMCTVC 449
            + H +  W TV Q++ +  Q    VC
Sbjct: 1598 LAHNVRMWRTVRQLLERTRQKRMAVC 1623


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 71  NSEH*QKKHQFHASFHAGQH 130
           +S+H Q  HQ H   H  QH
Sbjct: 272 SSQHQQPTHQTHHHHHHHQH 291


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 71  NSEH*QKKHQFHASFHAGQH 130
           +S+H Q  HQ H   H  QH
Sbjct: 272 SSQHQQPTHQTHHHHHHHQH 291


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 71  NSEH*QKKHQFHASFHAGQH 130
           +S+H Q  HQ H   H  QH
Sbjct: 224 SSQHQQPTHQTHHHHHHHQH 243


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,275
Number of Sequences: 2352
Number of extensions: 11548
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)