Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20819
         (745 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    24   1.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   7.9  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 618 LVMSVKVTKDHHLRRWVLLKHAAVPSCTLLKTELDPA 728
           L++S +V KDH ++R++   +   PS        DPA
Sbjct: 105 LLLSPEVGKDHRIKRFLRGVYRIKPSKPKYDVTWDPA 141


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = -1

Query: 256 SDVCADRLKDVVLQGMELFIPSSEVPVGGRSKPWYNK 146
           +DVC   L      G+++  P+  + V   ++PW+ +
Sbjct: 42  ADVCERFLAPKGFGGVQISPPNENLVVTSSNRPWWER 78


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -1

Query: 235 LKDVVLQGMELFI 197
           LK+VVL G+ELFI
Sbjct: 293 LKNVVLYGLELFI 305


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -2

Query: 198 FLLLRCPLGVAANPGIIKPVGMLHASSGPHTWH 100
           FL      GV A PG  K VG +  S+   +WH
Sbjct: 16  FLFFDLCHGVRA-PGAKKKVGPIDQSAAAASWH 47


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -2

Query: 198 FLLLRCPLGVAANPGIIKPVGMLHASSGPHTWH 100
           FL      GV A PG  K VG +  S+   +WH
Sbjct: 16  FLFFDLCHGVRA-PGAKKKVGPIDQSAAAASWH 47


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 668 YPSAEVVILGDFNAHHQEWL 609
           + S  VV L DF +H   W+
Sbjct: 447 FESPPVVFLNDFISHQHAWI 466


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 668 YPSAEVVILGDFNAHHQEWL 609
           + S  VV L DF +H   W+
Sbjct: 447 FESPPVVFLNDFISHQHAWI 466


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 668 YPSAEVVILGDFNAHHQEWL 609
           + S  VV L DF +H   W+
Sbjct: 447 FESPPVVFLNDFISHQHAWI 466


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 668 YPSAEVVILGDFNAHHQEWL 609
           + S  VV L DF +H   W+
Sbjct: 447 FESPPVVFLNDFISHQHAWI 466


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
          acetylcholinesterase protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 40 N*WIPRAAGIRHEG 81
          N W+P+   IRH G
Sbjct: 17 NIWVPQRLRIRHHG 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,387
Number of Sequences: 336
Number of extensions: 5053
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)