Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20819
(745 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 39 2e-04
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 38 3e-04
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 38 4e-04
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 36 0.001
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 34 0.005
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 33 0.012
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 31 0.028
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 31 0.038
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 29 0.15
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 28 0.35
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 28 0.35
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 25 2.5
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 2.5
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 25 2.5
DQ974172-1|ABJ52812.1| 409|Anopheles gambiae serpin 13 protein. 23 10.0
AY062198-1|AAL58559.1| 153|Anopheles gambiae cytochrome P450 CY... 23 10.0
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 38.7 bits (86), Expect = 2e-04
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -3
Query: 674 EQYPSAEVVILGDFNAHHQEWLGSRTTDLPGRAAYDF--ALSYGLSQLVTQPTRVPDMRS 501
E Y ++I GDFNA EW GS++T+ G A + L+ L + PT V + R
Sbjct: 108 EVYDVNPIIISGDFNAWATEW-GSKSTNARGNAVLEHFSRLNLVLVNVGFCPTFVRNSR- 165
Query: 500 TSLLCWTFC*PLTQLDTVW 444
TS++ TFC P W
Sbjct: 166 TSIIDLTFCSPALASSMNW 184
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 37.9 bits (84), Expect = 3e-04
Identities = 30/81 (37%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = -3
Query: 677 LEQYPSAEVVILGDFNAHHQEWLGSRTTDLPGRAAYDFALSYGLSQL--VTQPTRV-PDM 507
LE + VVI GDFNA H EW GSR +L G GLS L + PT +
Sbjct: 110 LEASSHSHVVIAGDFNAWHTEW-GSRRNNLRGEELLQMVEVLGLSILNNGSAPTFIGRGA 168
Query: 506 RSTSLLCWTFC*PLTQLDTVW 444
S++ TF P L W
Sbjct: 169 ARPSVIDVTFATPSLVLHDTW 189
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 37.5 bits (83), Expect = 4e-04
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -3
Query: 677 LEQYPSAEVVILGDFNAHHQEWLGSRTTD 591
LE + +VV+ GDFNA H+EW RT D
Sbjct: 121 LEGFSHPQVVVAGDFNARHEEWGSPRTCD 149
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 36.3 bits (80), Expect = 0.001
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -3
Query: 677 LEQYPSAEVVILGDFNAHHQEWLGSRTTDLPGRAAYDFALSYGL 546
LE +VV+ GDFNA H+EW GSR ++ G + + GL
Sbjct: 167 LEAQSHPQVVVAGDFNAWHEEW-GSRRSNERGEVLLEASQQLGL 209
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 33.9 bits (74), Expect = 0.005
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -3
Query: 653 VVILGDFNAHHQEWLGSRTTDLPGRAAYD-FA-LSYGLSQLVTQPTRVPDMRSTSLLCWT 480
+VI GDFNA EW GS+ T+ G A + FA L L T PT + R TS++ T
Sbjct: 113 LVIAGDFNAWAVEW-GSKRTNSRGDAVLESFARLGVTLGNAGTTPTFNRNKR-TSIVDIT 170
Query: 479 FC 474
FC
Sbjct: 171 FC 172
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 32.7 bits (71), Expect = 0.012
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 677 LEQYPSAEVVILGDFNAHHQEWLGSRTTD 591
LE ++VVI GDFNA H EW R ++
Sbjct: 111 LETLTHSQVVIAGDFNAWHVEWGSERNSE 139
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 31.5 bits (68), Expect = 0.028
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 677 LEQYPSAEVVILGDFNAHHQEWLGSR 600
LE + VV+ GDFNA H+EW R
Sbjct: 173 LEAASHSRVVVAGDFNAWHEEWGSGR 198
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 31.1 bits (67), Expect = 0.038
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 677 LEQYPSAEVVILGDFNAHHQEWLGSRTT 594
LE ++VVI GDFNA H EW +R +
Sbjct: 130 LEASTHSQVVIDGDFNAWHTEWGSARNS 157
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 29.1 bits (62), Expect = 0.15
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 659 AEVVILGDFNAHHQEWLGSRT 597
+ V++ GDFNA H +W SRT
Sbjct: 115 SRVLLAGDFNAMHLDWGSSRT 135
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 27.9 bits (59), Expect = 0.35
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 160 PWYNKTSRDAARLKRSAYVAFNVARRCPRA 71
PW ++T + R+KR+AY + RRC R+
Sbjct: 405 PWADRTLKRLKRVKRAAYRHYQ-TRRCQRS 433
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.9 bits (59), Expect = 0.35
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 653 VVILGDFNAHHQEWLGSRT 597
VV+ GDFNA H+ W +RT
Sbjct: 116 VVLGGDFNAWHEAWGSART 134
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 25.0 bits (52), Expect = 2.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 692 GDCRVLEQYPSAEVVILGDFNAH 624
G C E YPSAE+ + N H
Sbjct: 338 GGCECAEYYPSAEIQFMSLGNIH 360
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.0 bits (52), Expect = 2.5
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 129 HASSGPHTWHLMLLGDALVPNSCSPGDPLVLERPPPR 19
H SS PH+ HL+ + +P SPG LV PPP+
Sbjct: 96 HPSSSPHSNHLLGGPNHHLPPGASPG--LV---PPPQ 127
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 25.0 bits (52), Expect = 2.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 692 GDCRVLEQYPSAEVVILGDFNAH 624
G C E YPSAE+ + N H
Sbjct: 338 GGCECAEYYPSAEIQFMSLGNIH 360
Score = 23.0 bits (47), Expect = 10.0
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -2
Query: 168 AANPGIIKPVGMLHASSGPHTWH--LMLLGDALVP 70
+A+P ++ G+ +S P+ WH + D LVP
Sbjct: 999 SASPNRLESPGLNESSLSPNLWHGSIETSTDTLVP 1033
>DQ974172-1|ABJ52812.1| 409|Anopheles gambiae serpin 13 protein.
Length = 409
Score = 23.0 bits (47), Expect = 10.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 625 ITRSGWGPEPLTSRVGLPTIS 563
+ RSG P +S V LP++S
Sbjct: 168 VKRSGGSQSPASSSVALPSVS 188
>AY062198-1|AAL58559.1| 153|Anopheles gambiae cytochrome P450
CYP4J5 protein.
Length = 153
Score = 23.0 bits (47), Expect = 10.0
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 231 LSRSAQTSDHRRKGRAAPMGGMRKIHAF 314
+SRS H GR P G + +H F
Sbjct: 80 ISRSVTEEIHLPDGRIIPQGCIANLHIF 107
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 937,850
Number of Sequences: 2352
Number of extensions: 22961
Number of successful extensions: 63
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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