Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20819
(745 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032014-1|AAH32014.1| 496|Homo sapiens solute carrier family 1... 36 0.15
AF283317-1|AAK69539.1| 496|Homo sapiens orphan transporter SLC1... 36 0.15
AF271633-1|AAG53879.1| 496|Homo sapiens solute carrier 19A3 pro... 36 0.15
AC064853-2|AAX93157.1| 496|Homo sapiens unknown protein. 36 0.15
AL021068-2|CAI19782.1| 497|Homo sapiens solute carrier family 1... 31 3.3
AL021068-1|CAI19781.1| 459|Homo sapiens solute carrier family 1... 31 3.3
AJ238413-1|CAB50771.1| 497|Homo sapiens THTR-1 protein protein. 31 3.3
AJ237724-1|CAB50770.1| 497|Homo sapiens THTR-1 protein protein. 31 3.3
AF272359-1|AAK54468.1| 497|Homo sapiens thiamine transporter 1 ... 31 3.3
AF160812-1|AAF15129.1| 497|Homo sapiens thiamine transporter 1 ... 31 3.3
AF153330-1|AAD43534.1| 497|Homo sapiens thiamine carrier 1 prot... 31 3.3
AF135488-1|AAD45985.1| 497|Homo sapiens high affinity thiamine ... 31 3.3
>BC032014-1|AAH32014.1| 496|Homo sapiens solute carrier family 19,
member 3 protein.
Length = 496
Score = 35.9 bits (79), Expect = 0.15
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = -2
Query: 270 LSSDDLTSVRTDLKTWCFREWNYSFLLLRCPLGVAANPGIIKPVGMLHASSGPHTWHLML 91
LS D ++ F W YS+L+L P+ V + KPV +L S TW L+L
Sbjct: 39 LSGPDKNLTSAEITNEIFPVWTYSYLVLLLPVFVLTDYVRYKPVIILQGISFIITWLLLL 98
Query: 90 LGDAL 76
G +
Sbjct: 99 FGQGV 103
>AF283317-1|AAK69539.1| 496|Homo sapiens orphan transporter SLC19A3
protein.
Length = 496
Score = 35.9 bits (79), Expect = 0.15
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = -2
Query: 270 LSSDDLTSVRTDLKTWCFREWNYSFLLLRCPLGVAANPGIIKPVGMLHASSGPHTWHLML 91
LS D ++ F W YS+L+L P+ V + KPV +L S TW L+L
Sbjct: 39 LSGPDKNLTSAEITNEIFPVWTYSYLVLLLPVFVLTDYVRYKPVIILQGISFIITWLLLL 98
Query: 90 LGDAL 76
G +
Sbjct: 99 FGQGV 103
>AF271633-1|AAG53879.1| 496|Homo sapiens solute carrier 19A3
protein.
Length = 496
Score = 35.9 bits (79), Expect = 0.15
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = -2
Query: 270 LSSDDLTSVRTDLKTWCFREWNYSFLLLRCPLGVAANPGIIKPVGMLHASSGPHTWHLML 91
LS D ++ F W YS+L+L P+ V + KPV +L S TW L+L
Sbjct: 39 LSGPDKNLTSAEITNEIFPVWTYSYLVLLLPVFVLTDYVRYKPVIILQGISFIITWLLLL 98
Query: 90 LGDAL 76
G +
Sbjct: 99 FGQGV 103
>AC064853-2|AAX93157.1| 496|Homo sapiens unknown protein.
Length = 496
Score = 35.9 bits (79), Expect = 0.15
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = -2
Query: 270 LSSDDLTSVRTDLKTWCFREWNYSFLLLRCPLGVAANPGIIKPVGMLHASSGPHTWHLML 91
LS D ++ F W YS+L+L P+ V + KPV +L S TW L+L
Sbjct: 39 LSGPDKNLTSAEITNEIFPVWTYSYLVLLLPVFVLTDYVRYKPVIILQGISFIITWLLLL 98
Query: 90 LGDAL 76
G +
Sbjct: 99 FGQGV 103
>AL021068-2|CAI19782.1| 497|Homo sapiens solute carrier family 19
(thiamine transporter), member 2 protein.
Length = 497
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 210 WNYSFLLLRCPLGVAANPGIIKPVGMLHASSGPHTWHLMLLGDALV 73
W YS+L+L P+ +A + KPV +L S TW ++L L+
Sbjct: 77 WTYSYLVLLFPVFLATDYLRYKPVVLLQGLSLIVTWFMLLYAQGLL 122
>AL021068-1|CAI19781.1| 459|Homo sapiens solute carrier family 19
(thiamine transporter), member 2 protein.
Length = 459
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 210 WNYSFLLLRCPLGVAANPGIIKPVGMLHASSGPHTWHLMLLGDALV 73
W YS+L+L P+ +A + KPV +L S TW ++L L+
Sbjct: 77 WTYSYLVLLFPVFLATDYLRYKPVVLLQGLSLIVTWFMLLYAQGLL 122
>AJ238413-1|CAB50771.1| 497|Homo sapiens THTR-1 protein protein.
Length = 497
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 210 WNYSFLLLRCPLGVAANPGIIKPVGMLHASSGPHTWHLMLLGDALV 73
W YS+L+L P+ +A + KPV +L S TW ++L L+
Sbjct: 77 WTYSYLVLLFPVFLATDYLRYKPVVLLQGLSLIVTWFMLLYAQGLL 122
>AJ237724-1|CAB50770.1| 497|Homo sapiens THTR-1 protein protein.
Length = 497
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 210 WNYSFLLLRCPLGVAANPGIIKPVGMLHASSGPHTWHLMLLGDALV 73
W YS+L+L P+ +A + KPV +L S TW ++L L+
Sbjct: 77 WTYSYLVLLFPVFLATDYLRYKPVVLLQGLSLIVTWFMLLYAQGLL 122
>AF272359-1|AAK54468.1| 497|Homo sapiens thiamine transporter 1
protein.
Length = 497
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 210 WNYSFLLLRCPLGVAANPGIIKPVGMLHASSGPHTWHLMLLGDALV 73
W YS+L+L P+ +A + KPV +L S TW ++L L+
Sbjct: 77 WTYSYLVLLFPVFLATDYLRYKPVVLLQGLSLIVTWFMLLYAQGLL 122
>AF160812-1|AAF15129.1| 497|Homo sapiens thiamine transporter 1
protein.
Length = 497
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 210 WNYSFLLLRCPLGVAANPGIIKPVGMLHASSGPHTWHLMLLGDALV 73
W YS+L+L P+ +A + KPV +L S TW ++L L+
Sbjct: 77 WTYSYLVLLFPVFLATDYLRYKPVVLLQGLSLIVTWFMLLYAQGLL 122
>AF153330-1|AAD43534.1| 497|Homo sapiens thiamine carrier 1
protein.
Length = 497
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 210 WNYSFLLLRCPLGVAANPGIIKPVGMLHASSGPHTWHLMLLGDALV 73
W YS+L+L P+ +A + KPV +L S TW ++L L+
Sbjct: 77 WTYSYLVLLFPVFLATDYLRYKPVVLLQGLSLIVTWFMLLYAQGLL 122
>AF135488-1|AAD45985.1| 497|Homo sapiens high affinity thiamine
transporter protein.
Length = 497
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 210 WNYSFLLLRCPLGVAANPGIIKPVGMLHASSGPHTWHLMLLGDALV 73
W YS+L+L P+ +A + KPV +L S TW ++L L+
Sbjct: 77 WTYSYLVLLFPVFLATDYLRYKPVVLLQGLSLIVTWFMLLYAQGLL 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,273,500
Number of Sequences: 237096
Number of extensions: 3828814
Number of successful extensions: 11146
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11146
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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