Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20819
         (745 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    39   0.008
AE014134-3392|AAF53993.2|  241|Drosophila melanogaster CG2042-PA...    31   1.7  
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ...    29   5.1  
AE014297-1210|AAF54562.4| 1483|Drosophila melanogaster CG4509-PB...    29   8.8  

>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
           protein protein.
          Length = 110

 Score = 38.7 bits (86), Expect = 0.008
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = +3

Query: 36  LELVDPPGCRNSARGHLLATLNA 104
           LELVDPPGCRNSAR    A LN+
Sbjct: 10  LELVDPPGCRNSARDRQRANLNS 32


>AE014134-3392|AAF53993.2|  241|Drosophila melanogaster CG2042-PA
           protein.
          Length = 241

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -3

Query: 641 GDFNAHHQEWLGSRTTDLPGRAAYDFALSYGLSQLVT 531
           GD+N  H  W G+   +  GRA  +  LS G+S LVT
Sbjct: 57  GDWNTSHWLW-GAERCNRRGRALANLVLSTGMSSLVT 92


>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
           protein.
          Length = 1092

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
 Frame = -3

Query: 656 EVVILGDFNAHHQEWLGSRTTDLPGRAAYDFALSYGLSQLVT--QPTRVP-DMR-STSLL 489
           ++++ GD+NA H++W G       G A YD   +  ++++V     T  P D R S S +
Sbjct: 159 KLILCGDWNAKHRQW-GCIRACQRGAALYDAIQADSMAEIVATGSATHFPHDTRKSPSAI 217

Query: 488 CWTFC*PLTQLDTVWWSTLHL 426
            ++ C  L + +    S+ HL
Sbjct: 218 DFSICKRLGRYEKRISSSAHL 238


>AE014297-1210|AAF54562.4| 1483|Drosophila melanogaster CG4509-PB
           protein.
          Length = 1483

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +3

Query: 468 WSAEGPTKKARAPHVWDTGGLCHQL*EAVGQGEIVGSPTR 587
           WSAE P      P  W+      QL E VG+G+ +G   R
Sbjct: 551 WSAEKPPDTRTKPTRWEFHDGREQLDEDVGRGQDIGEGDR 590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,911,006
Number of Sequences: 53049
Number of extensions: 1112498
Number of successful extensions: 2869
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2869
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)