Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20819
         (745 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.3  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           23   2.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   4.0  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   4.0  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   7.0  
AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.     22   7.0  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 126 ASSGPHTWHLMLLGDALVPNSCS 58
           +S G  TW  +L+G  L+  SCS
Sbjct: 414 SSEGIQTWDGVLMGQRLLTMSCS 436


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
 Frame = +1

Query: 385 EWYGSTDKAV----IRRSKWSVDHHTVSSWVSGXXXXXXXXXXXXMSGTRVGCVTSCERP 552
           EW+G   K +    +     SV +H +S   +G            +SGT + C T  E  
Sbjct: 194 EWFGGNPKRITLIGLSAGGASVHYHYLSPLSAGLFQGGIS-----ISGTALNCWTQTENS 248

Query: 553 *DKAKS*AARPG 588
            +KAK   A  G
Sbjct: 249 LEKAKQVGAFMG 260


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
 Frame = +1

Query: 385 EWYGSTDKAV----IRRSKWSVDHHTVSSWVSGXXXXXXXXXXXXMSGTRVGCVTSCERP 552
           EW+G   K +    +     SV +H +S   +G            +SGT + C T  E  
Sbjct: 65  EWFGGNPKRITLIGLSAGGASVHYHYLSPLSAGLFQGGIS-----ISGTALNCWTQTENS 119

Query: 553 *DKAKS*AARPG 588
            +KAK   A  G
Sbjct: 120 LEKAKQVGAFMG 131


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
 Frame = +1

Query: 385 EWYGSTDKAV----IRRSKWSVDHHTVSSWVSGXXXXXXXXXXXXMSGTRVGCVTSCERP 552
           EW+G   K +    +     SV +H +S   +G            +SGT + C T  E  
Sbjct: 194 EWFGGNPKRITLIGLSAGGASVHYHYLSPLSAGLFQGGIS-----ISGTALNCWTQTENS 248

Query: 553 *DKAKS*AARPG 588
            +KAK   A  G
Sbjct: 249 LEKAKQVGAFMG 260


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = -2

Query: 156 GIIKPVGMLHASSGPHTWHLMLLGDALVPNS 64
           G+  P GM    SG  TW    +    VP S
Sbjct: 891 GMNVPYGMQRGQSGGQTWSNSQVQGVAVPGS 921


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -1

Query: 646 SLVTLTLITRSGWGPEPLTSRVGLPTISPCPTASHN 539
           S+ T  L+  SG GP+     +G+P +   P    N
Sbjct: 323 SVNTPQLLMLSGIGPKEHLRSLGIPVVVDLPGVGEN 358


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 650 VILGDFNAHHQEWLGSRTTDLP 585
           V+LG+ + HH+ +    +T+ P
Sbjct: 518 VMLGEISPHHEYYDSKSSTETP 539


>AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.
          Length = 238

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 650 VILGDFNAHHQEWLGSRTTDLP 585
           V+LG+ + HH+ +    +T+ P
Sbjct: 216 VMLGEISPHHEYYDSKSSTETP 237


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,450
Number of Sequences: 438
Number of extensions: 6159
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)