Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20819
(745 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g46768.1 68414.m05217 AP2 domain-containing protein RAP2.1 (R... 31 1.1
At3g60970.1 68416.m06823 ABC transporter family protein ABC tran... 30 1.9
At3g60160.1 68416.m06717 ABC transporter family protein similar ... 30 1.9
At1g25230.1 68414.m03131 purple acid phosphatase family protein ... 30 1.9
At1g29730.1 68414.m03634 leucine-rich repeat transmembrane prote... 29 3.3
At1g29740.1 68414.m03636 leucine-rich repeat family protein / pr... 29 4.3
At5g34900.1 68418.m04114 Ulp1 protease family protein contains P... 28 5.7
At3g47260.1 68416.m05133 Ulp1 protease family protein contains P... 28 5.7
At3g29210.1 68416.m03664 hypothetical protein similar to At1g328... 28 5.7
At2g14130.1 68415.m01574 Ulp1 protease family protein contains P... 28 5.7
At5g08160.2 68418.m00953 serine/threonine protein kinase, putati... 28 7.5
At5g08160.1 68418.m00952 serine/threonine protein kinase, putati... 28 7.5
At3g55590.1 68416.m06173 GDP-mannose pyrophosphorylase, putative... 28 7.5
At3g18560.1 68416.m02360 expressed protein 28 7.5
At5g43880.1 68418.m05366 expressed protein 27 9.9
At5g11550.1 68418.m01347 expressed protein 27 9.9
At3g30440.1 68416.m03851 Ulp1 protease family protein contains P... 27 9.9
>At1g46768.1 68414.m05217 AP2 domain-containing protein RAP2.1
(RAP2.1) identical to AP2 domain containing protein
RAP2.1 GI:2281627 from [Arabidopsis thaliana]
Length = 153
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 632 NAHHQEWLGSRTTDLPGRAAYDFALSY 552
N + WLGS TTD+ AYD A+ Y
Sbjct: 50 NKRSRLWLGSYTTDIAAARAYDVAVFY 76
>At3g60970.1 68416.m06823 ABC transporter family protein ABC
transporter-like proteins
Length = 1037
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -2
Query: 513 RHEEHEPSLLDLLLTTHPAGYSVVVDAPLGSSDHCLIRAAIPLSRPSRRT 364
R+ EH P++L + P G + V GS LI+A + PS T
Sbjct: 794 RYAEHFPAVLKNITCAFPGGKKIGVVGRTGSGKSTLIQALFRIVEPSHGT 843
>At3g60160.1 68416.m06717 ABC transporter family protein similar to
ATP-binding cassette transporter MRP8 GI:18031899 from
[Arabidopsis thaliana]
Length = 1490
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 513 RHEEHEPSLLDLLLTTHPAGYSVVVDAPLGSSDHCLIRAAIPLSRPSRRT 364
R+ EH P++L + P G + V GS LI+A + PS+ T
Sbjct: 1247 RYAEHFPAVLKNITCEFPGGKKIGVVGRTGSGKSTLIQALFRIVEPSQGT 1296
>At1g25230.1 68414.m03131 purple acid phosphatase family protein
contains Pfam profile: PF00149 calcineurin-like
phosphoesterase; similar to purple acid phosphatase
(GI:20257479) [Arabidopsis thaliana]
Length = 339
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = -2
Query: 441 VDAPLGSSDHCLIRAAIPLSRPSRRTTTGFRRVWR--YRSADWDGMREFYASHPWGRLCL 268
VD + DHCL + S T+ G + WR Y + M+ FY + + +
Sbjct: 246 VDLYMNGHDHCLQHISTSQSPIQFLTSGGGSKAWRGYYNWTTPEDMKFFYDGQGFMSVKI 305
Query: 267 SSDDLTSVRTDLKTWCFREWNYSFLL 190
+ +L+ V D+ +W+ S +L
Sbjct: 306 TRSELSVVFYDVSGNSLHKWDTSKML 331
>At1g29730.1 68414.m03634 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam domains, PF00560: Leucine
Rich Repeat and PF00069: Protein kinase domain
Length = 940
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 295 IPPMGAALPFLR*SDVCADRLKDVVLQGMELFI 197
IP A+LP+L+ VCA+RL + +G+ FI
Sbjct: 138 IPMEWASLPYLKSISVCANRLSGDIPKGLGKFI 170
>At1g29740.1 68414.m03636 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1049
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 295 IPPMGAALPFLR*SDVCADRLKDVVLQGMELFI 197
IP A+LP+L+ VCA+RL + +G+ FI
Sbjct: 138 IPMEWASLPYLKSISVCANRLTGDIPKGLGKFI 170
>At5g34900.1 68418.m04114 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At2g14130, At3g44500,
At2g15190, At3g47260, At3g29210, At2g02210, At3g32900
Length = 767
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 306 EFYASHPWGRLCLSSDDLTSVRTDLKTWCFREWN 205
E Y + PWG+ S + +R D KTW +++
Sbjct: 204 EMYTAQPWGKEAFSVLSNSILRMDEKTWAKEKYD 237
>At3g47260.1 68416.m05133 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At2g14130, At3g44500,
At2g15190, At5g34900, At3g29210, At2g02210, At3g32900
Length = 820
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 306 EFYASHPWGRLCLSSDDLTSVRTDLKTWCFREWN 205
E Y + PWG+ S + +R D KTW +++
Sbjct: 204 EMYTAQPWGKEAFSVLSNSILRMDEKTWAKEKYD 237
>At3g29210.1 68416.m03664 hypothetical protein similar to At1g32840,
At4g04010, At2g06430, At2g15140, At2g04980, At2g14130,
At3g44500, At2g15190, At3g47260, At5g34900, At2g02210,
At3g32900
Length = 594
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 306 EFYASHPWGRLCLSSDDLTSVRTDLKTWCFREWN 205
E Y + PWG+ S + +R D KTW +++
Sbjct: 176 EMYTAQPWGKEAFSVLSNSILRMDEKTWAKEKYD 209
>At2g14130.1 68415.m01574 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At3g44500, At2g15190,
At3g47260, At5g34900, At3g29210, At2g02210, At3g32900
Length = 808
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 306 EFYASHPWGRLCLSSDDLTSVRTDLKTWCFREWN 205
E Y + PWG+ S + +R D KTW +++
Sbjct: 204 EMYTAQPWGKEAFSVLSNSILRMDEKTWAKEKYD 237
>At5g08160.2 68418.m00953 serine/threonine protein kinase, putative
identical to serine/threonine protein kinase
[Arabidopsis thaliana] gi|2109293|gb|AAB69123
Length = 311
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 435 RRPPHCIQLGEWSAEGPTKKARAPHVWD 518
R +QL EW++E + RAP +WD
Sbjct: 185 RSRQEALQLQEWTSEHCSAPFRAPELWD 212
>At5g08160.1 68418.m00952 serine/threonine protein kinase, putative
identical to serine/threonine protein kinase
[Arabidopsis thaliana] gi|2109293|gb|AAB69123
Length = 347
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 435 RRPPHCIQLGEWSAEGPTKKARAPHVWD 518
R +QL EW++E + RAP +WD
Sbjct: 221 RSRQEALQLQEWTSEHCSAPFRAPELWD 248
>At3g55590.1 68416.m06173 GDP-mannose pyrophosphorylase, putative
strong similarity to GDP-mannose pyrophosphorylase from
Arabidopsis thaliana [GI:3598958], Pichia angusta
[GI:7331158]; contains Pfam profile PF00483 Nucleotidyl
transferase
Length = 364
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 531 CHQL*EAVGQ-GEIVGSPTREVSGSGPQPLLVMSVKVTKDHHLRRWVLLKHAAVPSCTLL 707
C Q E +G G + + + V GSG QP V++ V D+ L + +A +++
Sbjct: 80 CSQETEPLGTAGPLALARDKLVDGSG-QPFFVLNSDVISDYPLEEMIAFHNAHGGEASIM 138
Query: 708 KTELDPAS 731
T++D S
Sbjct: 139 VTKVDEPS 146
>At3g18560.1 68416.m02360 expressed protein
Length = 195
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +1
Query: 184 PQKKE*IIPFPEAPRL*VGPHRRQII-GGKAEPPPWVGCVKFTHSIPVC*PVPPNSSKPG 360
P KK + E G +R+I+ GGK EP + G + + S VPP S +
Sbjct: 114 PTKKTAVEMVMEEDEEEYGVWQREILMGGKCEPLDYSGVIYYDCSGHQLKQVPPRSPRAS 173
Query: 361 RRSTTRTREWYGS 399
TR + GS
Sbjct: 174 LVPERPTRSYVGS 186
>At5g43880.1 68418.m05366 expressed protein
Length = 836
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 156 QGLLRPPTGTSEEGMNNSIP*STTSLSRSAQTSDHRRKGRAAP 284
+G L+PP G + + S+P S+TSL + S ++ K P
Sbjct: 459 EGKLKPPKGLTR---SKSLPESSTSLGHKSLDSSNKSKSSRVP 498
>At5g11550.1 68418.m01347 expressed protein
Length = 314
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +1
Query: 271 AEPPPWVGCVKFTHSIP-VC*PVPPNSSKPGRRSTTRTREWYGSTDKAVIRRSKWSVDHH 447
A P P C F V P P+ +P R++TT + S+ ++W HH
Sbjct: 12 APPRPLFSCGFFRRCTQSVLSPTSPHQQQPRRKATTTSSSSSSSSTSTSQSFTQWRFPHH 71
>At3g30440.1 68416.m03851 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 601
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 306 EFYASHPWGRLCLSSDDLTSVRTDLKTWCFREWN 205
E Y + PWG+ S + +R D KTW +++
Sbjct: 142 ETYTAQPWGKEAFSVLSNSILRMDEKTWAKEKYD 175
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,470,357
Number of Sequences: 28952
Number of extensions: 485468
Number of successful extensions: 1246
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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