Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20818
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    26   0.35 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.3  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.9  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 92  YCCSSVVSQNLATNPILFRLTIKMFR 169
           Y C  +V  N A NPIL+ L    FR
Sbjct: 334 YFCRIMVYLNSAINPILYNLMSSKFR 359



 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 105 ELQQYYLITLFYKIYIYI 52
           E+++YY I  F +I +Y+
Sbjct: 325 EIEKYYNILYFCRIMVYL 342


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 200  YLYYGTLFNIYTYVEVF 250
            Y+YY T+F I T    F
Sbjct: 1216 YVYYATIFTIITATSSF 1232


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 14  RYWLVLRSAKRSKMYIY 64
           R +L+LR  KR   YIY
Sbjct: 106 RLYLILRPGKRFDEYIY 122


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 14  RYWLVLRSAKRSKMYIY 64
           R +L+LR  KR   YIY
Sbjct: 106 RLYLILRPGKRFDEYIY 122


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 119 NLATNPILFRLTIKMFRN 172
           N A NPIL+ +    FR+
Sbjct: 345 NSAVNPILYNIISSKFRS 362


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,177
Number of Sequences: 336
Number of extensions: 3341
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)