Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20818
         (710 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3709|AAF56392.2|  255|Drosophila melanogaster CG11839-P...    31   1.5  
X99675-1|CAA67993.1|  976|Drosophila melanogaster metabotropic g...    30   3.6  
AE014135-153|AAF59402.1|  976|Drosophila melanogaster CG11144-PA...    30   3.6  
AY075577-1|AAL68382.1| 1489|Drosophila melanogaster SD05887p pro...    29   4.7  
AE013599-3585|AAF46990.2| 1489|Drosophila melanogaster CG3493-PA...    29   4.7  

>AE014297-3709|AAF56392.2|  255|Drosophila melanogaster CG11839-PA
           protein.
          Length = 255

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +1

Query: 442 LNNSVDDTNRNFMSFSKCQSFISLTKCNFHY-CSQVLTPLTCSIK*RNNFKTVHCSSE 612
           +NN      +  +S SK  + +SLT+ N+ Y  S +LT + C I  + N   VH +S+
Sbjct: 1   MNNGNIKRLQKKLSVSKKPALVSLTELNYTYDSSGILTCIICRIPIKPNVWKVHINSK 58


>X99675-1|CAA67993.1|  976|Drosophila melanogaster metabotropic
           glutamate receptor protein.
          Length = 976

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +3

Query: 282 VLFCRIKKIPSYFVKFTSQFLITVCSITQVNSKKISLEF 398
           +L C+I+ +   F +  +  LIT+C+I  + ++KI   F
Sbjct: 775 ILKCKIQDMSFLFSQLYNMILITICTIYAIKTRKIPENF 813


>AE014135-153|AAF59402.1|  976|Drosophila melanogaster CG11144-PA
           protein.
          Length = 976

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +3

Query: 282 VLFCRIKKIPSYFVKFTSQFLITVCSITQVNSKKISLEF 398
           +L C+I+ +   F +  +  LIT+C+I  + ++KI   F
Sbjct: 775 ILKCKIQDMSFLFSQLYNMILITICTIYAIKTRKIPENF 813


>AY075577-1|AAL68382.1| 1489|Drosophila melanogaster SD05887p protein.
          Length = 1489

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 427  SKIQILNNSVDD-TNRNFMSFSKCQSFISLTKCN 525
            SK++ + N V D TNRN     KC++F+ L + N
Sbjct: 1370 SKLKEIMNEVQDVTNRNLFLEQKCENFLILEQSN 1403


>AE013599-3585|AAF46990.2| 1489|Drosophila melanogaster CG3493-PA
            protein.
          Length = 1489

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 427  SKIQILNNSVDD-TNRNFMSFSKCQSFISLTKCN 525
            SK++ + N V D TNRN     KC++F+ L + N
Sbjct: 1370 SKLKEIMNEVQDVTNRNLFLEQKCENFLILEQSN 1403


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,297,412
Number of Sequences: 53049
Number of extensions: 487846
Number of successful extensions: 1111
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)